src/hg/makeDb/doc/tetNig2.txt 1.9

Index: src/hg/makeDb/doc/tetNig2.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/tetNig2.txt,v
retrieving revision 1.8
retrieving revision 1.9
diff -b -B -U 4 -r1.8 -r1.9
--- src/hg/makeDb/doc/tetNig2.txt	9 Jan 2010 00:28:46 -0000	1.8
+++ src/hg/makeDb/doc/tetNig2.txt	11 Feb 2010 23:43:29 -0000	1.9
@@ -800,4 +800,12 @@
     hgsql qapushq < tetNig2.pushQ.sql
     #	in that pushQ entry walk through each entry and see if the
     #	sizes will set properly
 ############################################################################
+# Create cpgIslandExt (DONE - 2010-02-11 - Hiram)
+    mkdir /hive/data/genomes/tetNig2/bed/cpgIslands
+    cd /hive/data/genomes/tetNig2/bed/cpgIslands
+    doCpgIslands.pl -dbHost=hgwdev -workhorse=hgwdev -buildDir=`pwd` tetNig2
+    featureBits tetNig2 cpgIslandExt
+    #	22165067 bases of 302314788 (7.332%) in intersection
+
+############################################################################