src/hg/blastToPsl/tests/makefile 1.22

Index: src/hg/blastToPsl/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/blastToPsl/tests/makefile,v
retrieving revision 1.21
retrieving revision 1.22
diff -b -B -U 4 -r1.21 -r1.22
--- src/hg/blastToPsl/tests/makefile	6 Jan 2010 21:09:18 -0000	1.21
+++ src/hg/blastToPsl/tests/makefile	6 Feb 2010 08:17:50 -0000	1.22
@@ -7,9 +7,12 @@
 
 test:	protMrnaTest protDnaTest mrnaDnaTest mrnaDnaxTest \
 	blockBugTest identityBugTest protMrnaEval1Test protMrnaEval2Test \
 	longDbNameTest multiLineDescTest tblastxTest tblastnTest \
-	blastpPsiTest psiNoHitsTest psiBadFormatTest blastpPsiWrapTest
+	blastpPsiTest psiNoHitsTest psiBadFormatTest blastpPsiWrapTest \
+
+# blast+ not implemented yet
+#	blastn+Test
 
 #tblastnDbFirstTest megaBlastTest
 
 protMrnaTest: mkdirs
@@ -129,8 +132,17 @@
 	pslCheck -verbose=0 output/$@.psl
 	diff -u expected/$@.psl output/$@.psl
 	diff -u expected/$@.bscores output/$@.bscores
 	diff -u expected/$@.err output/$@.err
+
+# blast+ changes output format
+blastn+Test: mkdirs
+	${blastToPsl} -scores=output/$@.bscores input/blastn+.blast output/$@.psl >output/$@.err 2>&1
+	pslCheck -verbose=0 output/$@.psl
+	diff -u expected/$@.psl output/$@.psl
+	diff -u expected/$@.bscores output/$@.bscores
+
+
 clean::
 	rm -rf output
 
 mkdirs: