src/hg/instinct/hgMicroscope/microscope.as 1.1

1.1 2010/02/10 19:48:55 cszeto
Cancer version of visiGene
Index: src/hg/instinct/hgMicroscope/microscope.as
===================================================================
RCS file: src/hg/instinct/hgMicroscope/microscope.as
diff -N src/hg/instinct/hgMicroscope/microscope.as
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/instinct/hgMicroscope/microscope.as	10 Feb 2010 19:48:55 -0000	1.1
@@ -0,0 +1,60 @@
+table fileLocation
+"Location of image, typically a file directory"
+    (
+    int id;	"ID of location"
+    lstring name;	"Directory path usually"
+    )
+
+table submissionSource
+"Source of data - an external database, a contributor, etc."
+    (
+    int id;                     "ID of submission source"
+    string name;                "Short name: Jackson Lab, Paul Gray, etc."
+    )
+
+table submissionSet
+"Info on a batch of images submitted at once"
+    (
+    int id;                     "ID of submission set"
+    string name;                "Name of submission set"
+    int submissionSource;       "Source of this submission"
+    int privateUser;            "ID of user allowed to view. If 0 all can see."
+    int copyright;              "Copyright notice"
+    )
+
+table copyright
+"Copyright information"
+    (
+    int id;     "ID of copyright"
+    lstring notice;     "Text of copyright notice"
+    )
+
+table contributor
+"Info on contributor"
+    (
+    int id;     "ID of contributor"
+    string name;        "Name in format like Kent W.J."
+    )
+
+table imageFile
+"A biological image file"
+    (
+    int id;             "ID of imageFile"
+    string fileName;    "Image file name, not including directory"
+    float priority;     "Lower priorities are displayed first"
+    int imageWidth;     "Width of image in pixels"
+    int imageHeight;    "Height of image in pixels"
+    int fullLocation;   "Location of full-sized image"
+    int thumbLocation;  "Location of thumbnail-sized image"
+    int submissionSet;  "Submission set this is part of"
+    string submitId;    "ID within submission set"
+    )
+
+table image
+"An image.  There may be multiple images within an imageFile"
+    (
+    int id;             "ID of image"
+    int submissionSet;  "Submission set this is part of"
+    int imageFile;      "ID of image file"
+    int imagePos;       "Position in image file, starting with 0"
+    )