src/hg/lib/genomicSuperDups.as 1.3

1.3 2010/02/08 19:43:43 hartera
Added some missing fields compared tot the sql definition and changed some of the descriptions as suggested by the data provider for this track.

Index: src/hg/lib/genomicSuperDups.as
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/lib/genomicSuperDups.as,v
retrieving revision 1.2
retrieving revision 1.3
diff -b -B -U 4 -r1.2 -r1.3
--- src/hg/lib/genomicSuperDups.as	3 Feb 2006 19:08:42 -0000	1.2
+++ src/hg/lib/genomicSuperDups.as	8 Feb 2010 19:43:43 -0000	1.3
@@ -9,13 +9,15 @@
   char[1] strand;       "Value should be + or -"
   string otherChrom;   "Other chromosome or scaffold"
   uint otherStart;   "Start in other  sequence"
   uint otherEnd;     "End in other  sequence"
-  uint otherSize;    "Total size of other sequence"
-  uint uid;       "unique id"
-  uint posBasesHit;       "HitPositive UnCovered"
-  string testResult;       "HitPositive (yes or no) UnCovered (covered=0)"
-  string verdict;       "Real or Allele"
+  uint otherSize;    "Total size of other sequence (otherEnd - otherStart)"
+  uint uid;       "Unique id shared by the query and subject"
+  uint posBasesHit;       "For future use"
+  string testResult;       "For future use"
+  string verdict;       "For future use"
+  string chits;       "For future use"
+  string ccov;       "For future use"
   string alignfile;       "alignment file path"
   uint alignL;       "spaces/positions in alignment"
   uint indelN;       "number of indels"
   uint indelS;       "indel spaces"