src/hg/utils/automation/doRecipBest.pl 1.12

Index: src/hg/utils/automation/doRecipBest.pl
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/utils/automation/doRecipBest.pl,v
retrieving revision 1.11
retrieving revision 1.12
diff -b -B -U 4 -r1.11 -r1.12
--- src/hg/utils/automation/doRecipBest.pl	21 Jul 2008 18:07:16 -0000	1.11
+++ src/hg/utils/automation/doRecipBest.pl	4 Feb 2010 18:33:56 -0000	1.12
@@ -298,10 +298,17 @@
 $splitRef =  (`wc -l < $HgAutomate::clusterData/$tDb/chrom.sizes` 
                         <= $HgAutomate::splitThreshold);
 
 # Establish what directory we will work in.
-$buildDir = $opt_buildDir ? $opt_buildDir :
-  "$HgAutomate::clusterData/$tDb/$HgAutomate::trackBuild/blastz.$qDb";
+if ($opt_buildDir) {
+    $buildDir = $opt_buildDir;
+} else {
+$buildDir = "$HgAutomate::clusterData/$tDb/$HgAutomate::trackBuild/blastz.$qDb";
+if (! -d $buildDir) {
+$buildDir = "$HgAutomate::clusterData/$tDb/$HgAutomate::trackBuild/lastz.$qDb";
+}
+die "can not find existing build directory:\n$buildDir\n";
+}
 
 # Do everything.
 $stepper->execute();