src/hg/makeDb/trackDb/tRNAs.html 1.4
1.4 2010/03/16 16:58:16 katrina
made a few minor edits
Index: src/hg/makeDb/trackDb/tRNAs.html
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RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/tRNAs.html,v
retrieving revision 1.3
retrieving revision 1.4
diff -b -B -U 4 -r1.3 -r1.4
--- src/hg/makeDb/trackDb/tRNAs.html 10 Feb 2010 23:49:46 -0000 1.3
+++ src/hg/makeDb/trackDb/tRNAs.html 16 Mar 2010 16:58:16 -0000 1.4
@@ -18,9 +18,9 @@
<P>
What does the tRNAscan-SE score mean? Anything with a score above 20 bits is likely to be
<I>derived</I> from a tRNA, although this does not indicate whether the tRNA gene still encodes a
functional tRNA molecule (i.e. tRNA-derived SINES probably do not function in the ribosome in translation).
-For vertebrate tRNAs, we believe a score of >60.0 (bits) are likely to encode functional tRNA genes, and
+Vertebrate tRNAs with scores of >60.0 (bits) are likely to encode functional tRNA genes, and
those with scores below ~45 have sequence or structural features that indicate they probably are
no longer involved in translation. tRNAs with scores between 45-60 bits are in the "grey" zone, and may
or may not have all the required features to be functional. In these cases, tRNAs should be inspected
carefully for loss of specific primary or secondary structure features (usually in alignments with other
@@ -48,9 +48,9 @@
Eddy SR, Durbin R. RNA sequence analysis using covariance
models. <EM>Nucleic Acids Res</EM>. 1994 Jun 11;22(11):2079-88.<BR>
</P>
<P>
-Cove-predicted tRNA secondary structures were rendered by NAVIEW (c) 1988 Robert E. Bruccoleri
+Cove-predicted tRNA secondary structures were rendered by NAVIEW (c) 1988 Robert E. Bruccoleri.
</P>
<H2>References</H2>
<P>