tdreszer: changes by commit

review to branch (2010-03-16 to 2010-03-23) v227

• Finally making progress on a metadata table.
  • src/hg/inc/metaTbl.h 1.1 - lines changed: 194, context: html, text, full: html, text
  • src/hg/lib/makefile 1.404 - lines changed: 1, context: html, text, full: html, text
  • src/hg/lib/metaTbl.as 1.1 - lines changed: 9, context: html, text, full: html, text
  • src/hg/lib/metaTbl.c 1.1 - lines changed: 767, context: html, text, full: html, text
  • src/hg/lib/metaTbl.sql 1.1 - lines changed: 22, context: html, text, full: html, text
• Thought this quick lookup of row count would help
  • src/hg/inc/jksql.h 1.87 - lines changed: 3, context: html, text, full: html, text
  • src/hg/lib/jksql.c 1.139 - lines changed: 9, context: html, text, full: html, text
• Needed another flavor of chopByWhite that respects quotes
  • src/inc/common.h 1.168 - lines changed: 9, context: html, text, full: html, text
  • src/lib/common.c 1.146 - lines changed: 74, context: html, text, full: html, text
• Initial check-in of utility to update/add/remove metaTbl entries.
  • src/hg/makeDb/metaTblUpdate/makefile 1.1 - lines changed: 19, context: html, text, full: html, text
  • src/hg/makeDb/metaTblUpdate/metaTblUpdate.c 1.1 - lines changed: 141, context: html, text, full: html, text
• Undossified
  • src/hg/encode/DAFs/2.0/nhgriElnitskiBiPro.daf 1.2 - lines changed: 0, context: html, text, full: html, text
  • src/hg/encode/DAFs/2.0/uwChipSeq.daf 1.2 - lines changed: 0, context: html, text, full: html, text
• Extended API for query and print functions
  • src/hg/inc/metaTbl.h 1.2 - lines changed: 51, context: html, text, full: html, text
  • src/hg/lib/metaTbl.c 1.2 - lines changed: 311, context: html, text, full: html, text
• Undossified and using changed API
  • src/hg/makeDb/metaTblUpdate/metaTblUpdate.c 1.2 - lines changed: 36, context: html, text, full: html, text
• Initial print functionality but just starting to test
  • src/hg/makeDb/metaTblUpdate/metaTblPrint.c 1.1 - lines changed: 150, context: html, text, full: html, text
• Added metaTblPrint and keeping in one directory for now.
  • src/hg/makeDb/metaTblUpdate/makefile 1.2 - lines changed: 23, context: html, text, full: html, text
• This should get undossified. Why isn't it
  • src/hg/makeDb/metaTblUpdate/metaTblUpdate.c 1.3 - lines changed: 0, context: html, text, full: html, text
• The most useful query yet: all objs that contain every var=val pair provided.
  • src/hg/inc/metaTbl.h 1.3 - lines changed: 18, context: html, text, full: html, text
  • src/hg/lib/metaTbl.c 1.3 - lines changed: 298, context: html, text, full: html, text
  • src/hg/makeDb/metaTblUpdate/metaTblPrint.c 1.2 - lines changed: 70, context: html, text, full: html, text
• Added support routines for hgTrackUi using metaTbl
  • src/hg/inc/metaTbl.h 1.4 - lines changed: 21, context: html, text, full: html, text
  • src/hg/lib/metaTbl.c 1.4 - lines changed: 228, context: html, text, full: html, text
• Added support for hgTrackUi to support metadata from metaTbl instead of trackDb
  • src/hg/inc/hui.h 1.146 - lines changed: 3, context: html, text, full: html, text
  • src/hg/lib/hui.c 1.265 - lines changed: 49, context: html, text, full: html, text
• Altered API to put sql connection inside lib API
  • src/hg/makeDb/metaTblUpdate/metaTblPrint.c 1.3 - lines changed: 5, context: html, text, full: html, text
  • src/hg/makeDb/metaTblUpdate/metaTblUpdate.c 1.4 - lines changed: 4, context: html, text, full: html, text
• Preferably use the new metaTbl over the trackDb and fileDb.ra settings.
  • src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl 1.29 - lines changed: 19, context: html, text, full: html, text