src/hg/lib/pgSiftPred.sql 1.1

Index: src/hg/lib/pgSiftPred.sql
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RCS file: src/hg/lib/pgSiftPred.sql
diff -N src/hg/lib/pgSiftPred.sql
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/pgSiftPred.sql	8 Mar 2010 17:45:41 -0000	1.1
@@ -0,0 +1,21 @@
+# pgSiftPred.sql was originally generated by the autoSql program, which also 
+# generated pgSiftPred.c and pgSiftPred.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#sift predictions for pgSnp tracks
+CREATE TABLE pgSiftPred (
+    chrom varchar(255) not null,	# Chromosome
+    chromStart int unsigned not null,	# Start position in chrom
+    chromEnd int unsigned not null,	# End position in chrom
+    prediction varchar(255) not null,	# sifts prediction, damaging, tolerated,...
+    geneId varchar(255),	# gene ID, Ensembl
+    geneName varchar(255),	# gene name
+    geneDesc longblob,	# gene description
+    protFamDesc longblob,	# protein family description
+    omimDisease varchar(255),	# OMIM disease
+    aveAlleleFreq varchar(255),	# Average allele frequencies
+    ceuAlleleFreq varchar(255),	# Caucasian allele frequencies
+              #Indices
+    INDEX(chrom(20), chromStart)
+);