src/hg/makeDb/hgBedsToBedExps/bToBeCfg.sql 1.2
1.2 2010/03/08 23:35:38 kent
Small tweaking to get it to work with real rather than pretend data.
Index: src/hg/makeDb/hgBedsToBedExps/bToBeCfg.sql
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/hgBedsToBedExps/bToBeCfg.sql,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/makeDb/hgBedsToBedExps/bToBeCfg.sql 26 Nov 2007 00:18:44 -0000 1.1
+++ src/hg/makeDb/hgBedsToBedExps/bToBeCfg.sql 8 Mar 2010 23:35:38 -0000 1.2
@@ -1,17 +1,17 @@
# bToBeCfg.sql was originally generated by the autoSql program, which also
# generated bToBeCfg.c and bToBeCfg.h. This creates the database representation of
# an object which can be loaded and saved from RAM in a fairly
# automatic way.
#Helper to convert bed files to bed+exp file.
CREATE TABLE bToBeCfg (
factor varchar(255) not null, # Protein factor, antibody, etc.
source varchar(255) not null, # Cell line, tissue, etc.
sourceId varchar(255) not null, # Short ID (one letter usually) for source
dataSource varchar(255) not null, # Either 'file' or a database name
- dataType varchar(255) not null, # Either 'bedScore' or 'bedGraph'
+ scoreCol int not null, # Score column Index
multiplier float not null, # Multiply by this to get score close to 0-1 range.
dataTable varchar(255) not null, # File name or table name
#Indices
PRIMARY KEY(factor)
);