src/hg/encode/encodeValidate/manual.all.txt 1.2
1.2 2010/03/30 23:25:04 kate
Add assembly to reports
Index: src/hg/encode/encodeValidate/manual.all.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeValidate/manual.all.txt,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/encode/encodeValidate/manual.all.txt 2 Feb 2010 18:49:06 -0000 1.1
+++ src/hg/encode/encodeValidate/manual.all.txt 30 Mar 2010 23:25:04 -0000 1.2
@@ -1,21 +1,21 @@
-Project Project-PI Lab Lab-PI Data_Type Cell_Type Experiment_Parameters Experimental_Factors Freeze Submit_Date Release_Date Status Submission_IDs
-Broad Bernstein Broad Bernstein Mapability Reference_genome 36bp Sequence_size=36bp Jul-09 06/02/09 07/24/09 released 344
-Duke Crawford Duke Crawford Mapability Reference_genome 20bp Sequence_size=20bp Nov-08 12/03/08 07/24/09 released 104
-Duke Crawford Duke Crawford Mapability Reference_genome 24bp Sequence_size=24bp Nov-08 12/03/08 07/24/09 released 104
-Duke Crawford Duke Crawford Mapability Reference_genome 35bp Sequence_size=35bp Nov-08 12/03/08 07/24/09 released 104
-Duke Crawford Duke Crawford Mapability Reference_genome Excluded Descr=Excluded Nov-08 12/03/08 07/24/09 released 104
-UMass-Dekker Dekker UMass-Dekker Dekker Mapability Reference_genome 15bp Sequence_size=15bp Jul-2009 2009-06-04 2009-07-24 released 345
-Gencode Hubbard Gencode Hubbard Genes Reference_genome V1 Version=V1 Nov-08 10/08/08 replaced 21
-Gencode Hubbard Gencode Hubbard Genes Reference_genome V2 Version=V2 Feb-09 03/05/09 03/05/09 released 265
-Gencode Hubbard Gencode Hubbard Genes Reference_genome V3c Version=V3 Sep-09 10/27/09 displayed 453
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome hg18 Genome=hg18 Feb-09 01/26/09 07/30/09 released 294
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome bosTau4 Genome=bosTau4 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome canFam2 Genome=canFam2 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome mm9 Genome=mm9 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome panTro2 Genome=panTro2 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome rheMac2 Genome=rheMac2 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome rn4 Genome=rn4 Jul-09 04/27/09 07/30/09 released 200
-NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 EB;G-gamma Reg=EB Promoter=G-gamma Nov-08 11/25/08 09/24/09 released 100
-NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 EB;SV40 Reg=EB Promoter=SV40 Nov-08 11/25/08 09/24/09 released 100
-NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 Si;G-gamma Reg=Si Promoter=G-gamma Nov-08 11/25/08 09/24/09 released 100
-NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 Si;SV40 Reg=Si Promoter=SV40 Nov-08 11/25/08 09/24/09 released 100
+Project Project-PI Lab Lab-PI Data_Type Cell_Type Experiment_Parameters Experimental_Factors Freeze Submit_Date Release_Date Status Submission_IDs Treatment Assembly
+Broad Bernstein Broad Bernstein Mapability Reference_genome 36bp Sequence_size=36bp Jul-2009 06/02/09 07/24/09 released 344 none hg18
+Duke Crawford Duke Crawford Mapability Reference_genome 20bp Sequence_size=20bp Nov-2008 12/03/08 07/24/09 released 104 none hg18
+Duke Crawford Duke Crawford Mapability Reference_genome 24bp Sequence_size=24bp Nov-2008 12/03/08 07/24/09 released 104 none hg18
+Duke Crawford Duke Crawford Mapability Reference_genome 35bp Sequence_size=35bp Nov-2008 12/03/08 07/24/09 released 104 none hg18
+Duke Crawford Duke Crawford Mapability Reference_genome Excluded Descr=Excluded Nov-2008 12/03/08 07/24/09 released 104 none hg18
+UMass-Dekker Dekker UMass-Dekker Dekker Mapability Reference_genome 15bp Sequence_size=15bp Jul-2009 2009-06-04 2009-07-24 released 345 none hg18
+Gencode Hubbard Gencode Hubbard Genes Reference_genome V1 Version=V1 Nov-2008 10/08/08 replaced 21 none hg18
+Gencode Hubbard Gencode Hubbard Genes Reference_genome V2 Version=V2 Feb-2009 03/05/09 03/05/09 released 265 none hg18
+Gencode Hubbard Gencode Hubbard Genes Reference_genome V3c Version=V3 Sep-2009 10/27/09 displayed 453 none hg18
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome hg18 Genome=hg18 Feb-2009 01/26/09 07/30/09 released 294 none hg18
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome bosTau4 Genome=bosTau4 Jul-2009 04/27/09 07/30/09 released 200 none bosTau4
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome canFam2 Genome=canFam2 Jul-2009 04/27/09 07/30/09 released 200 none canFam2
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome mm9 Genome=mm9 Jul-2009 04/27/09 07/30/09 released 200 none mm9
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome panTro2 Genome=panTro2 Jul-2009 04/27/09 07/30/09 released 200 none panTro2
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome rheMac2 Genome=rheMac2 Jul-2009 04/27/09 07/30/09 released 200 none rheMac2
+NHGRI-Elnitski Elnitski NHGRI Elnitski BIP Reference_Genome rn4 Genome=rn4 Jul-2009 04/27/09 07/30/09 released 200 none rn4
+NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 EB;G-gamma Reg=EB Promoter=G-gamma Nov-2008 11/25/08 09/24/09 released 100 none hg18
+NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 EB;SV40 Reg=EB Promoter=SV40 Nov-2008 11/25/08 09/24/09 released 100 none hg18
+NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 Si;G-gamma Reg=Si Promoter=G-gamma Nov-2008 11/25/08 09/24/09 released 100 none hg18
+NHGRI-Elnitski Elnitski NHGRI Elnitski NRE K562 Si;SV40 Reg=Si Promoter=SV40 Nov-2008 11/25/08 09/24/09 released 100 none hg18