src/hg/encode/validateFiles/validateFiles.c 1.39
1.39 2010/03/31 18:37:19 braney
oops, remove BAM from the usage message if USE_BAM not defined
Index: src/hg/encode/validateFiles/validateFiles.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/validateFiles/validateFiles.c,v
retrieving revision 1.38
retrieving revision 1.39
diff -b -B -U 4 -r1.38 -r1.39
--- src/hg/encode/validateFiles/validateFiles.c 31 Mar 2010 18:35:24 -0000 1.38
+++ src/hg/encode/validateFiles/validateFiles.c 31 Mar 2010 18:37:19 -0000 1.39
@@ -70,10 +70,12 @@
" fastq : Fasta with quality scores (see http://maq.sourceforge.net/fastq.shtml)\n"
" csfasta : Colorspace fasta (implies -colorSpace) (see link below)\n"
" csqual : Colorspace quality (see link below)\n"
" (see http://marketing.appliedbiosystems.com/mk/submit/SOLID_KNOWLEDGE_RD?_JS=T&rd=dm)\n"
+#ifdef USE_BAM
" BAM : Binary Alignment/Map\n"
" (see http://samtools.sourceforge.net/SAM1.pdf)\n"
+#endif
" bigWig : Big Wig\n"
" (see http://genome.ucsc.edu/goldenPath/help/bigWig.html\n"
"\n"
" -chromDb=db Specify DB containing chromInfo table to validate chrom names\n"