src/hg/hgc/lowelab.c 1.48
1.48 2010/03/30 20:18:30 pchan
change description for homologous gene track
Index: src/hg/hgc/lowelab.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/lowelab.c,v
retrieving revision 1.47
retrieving revision 1.48
diff -b -B -U 4 -r1.47 -r1.48
--- src/hg/hgc/lowelab.c 22 Mar 2010 04:18:14 -0000 1.47
+++ src/hg/hgc/lowelab.c 30 Mar 2010 20:18:30 -0000 1.48
@@ -906,11 +906,11 @@
printf("<A HREF=\"%s\" TARGET=_BLANK>PNG</A> \n", treePngFileName);
printf("<A HREF=\"%s\" TARGET=_BLANK>PDF</A> \n", treePdfFileName);
printf("<A HREF=\"%s\" TARGET=_BLANK>Text</A> <BR>\n", treeFileName);
- printf("<BR>Homologous genes of this protein were retrieved by BLASTP. ");
+ printf("<BR>The 20 highest scoring homologous genes of this protein were retrieved by BLASTP from the genomes available in the UCSC microbial genome browser. ");
printf("The alignments of the protein sequences, made by <A HREF=\"http://www.drive5.com/muscle/\" TARGET=_BLANK>MUSCLE</A>, ");
- printf("were used to construct the phylogenetic tree. This maximum likelihood tree was computed by using ");
+ printf("were used to construct the phylogenetic tree. This maximum likelihood unrooted tree was computed by using ");
printf("<A HREF=\"http://www.atgc-montpellier.fr/phyml/\" TARGET=_BLANK>PHYML</A> with the Jones Taylor Thornton model of sequence evolution, ");
printf("by including a Gamma-correction (eight categories of evolutionary rates, ");
printf("an estimated alpha-parameter and an estimated proportion of invariant sites).<BR>");
}