src/hg/makeDb/doc/ailMel1.txt 1.6

1.6 2010/03/30 21:15:30 chinhli
Adding BLASTZ, Chain/Net Support
Index: src/hg/makeDb/doc/ailMel1.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/ailMel1.txt,v
retrieving revision 1.5
retrieving revision 1.6
diff -b -B -U 4 -r1.5 -r1.6
--- src/hg/makeDb/doc/ailMel1.txt	30 Mar 2010 16:01:48 -0000	1.5
+++ src/hg/makeDb/doc/ailMel1.txt	30 Mar 2010 21:15:30 -0000	1.6
@@ -292,12 +292,8 @@
     cat fb.felCatV17e.chainAilMel1Link.txt
     # 1503647735 bases of 1990635005 (75.536%) in intersection
 
 
-    # need to change name back due to the seq1 and seq2 switch
-    # more TODO  XXXX 03/29
-    # name ???cat fb.ailMel1.chainFelCatV17eLink.txt
-    #   ???? 2047068864 bases of 2897316137 (70.654%) in intersection
     mkdir /hive/data/genomes/felCatV17e/bed/blastz.ailMel1.swap
     cd /hive/data/genomes/felCatV17e/bed/blastz.ailMel1.swap
     time nice -n +19 doBlastzChainNet.pl -verbose=2 \
         /hive/data/genomes/ailMel1/bed/lastzFelCatV17e.2010-03-22/DEF \