src/hg/makeDb/doc/danRer6.txt 1.18

1.18 2010/04/05 18:20:01 galt
added liftoverchain to danRer5
Index: src/hg/makeDb/doc/danRer6.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/danRer6.txt,v
retrieving revision 1.17
retrieving revision 1.18
diff -b -B -U 4 -r1.17 -r1.18
--- src/hg/makeDb/doc/danRer6.txt	16 Feb 2010 23:42:14 -0000	1.17
+++ src/hg/makeDb/doc/danRer6.txt	5 Apr 2010 18:20:01 -0000	1.18
@@ -1372,5 +1372,10 @@
     ssh hgwdev
     cd /cluster/data/danRer6/bed/multiz6way/frames
     nice hgLoadMafFrames danRer6 multiz6wayFrames multiz6way.mafFrames.gz
 
+############################################################################
+# CREATE LIFTOVER CHAINS FROM danRer6 TO danRer5 (DONE 2010-04-02 galt)
+    doSameSpeciesLiftOver.pl -debug danRer6 danRer5
+    cd /hive/data/genomes/danRer6/bed/blat.danRer5.2010-04-02
+    doSameSpeciesLiftOver.pl danRer6 danRer5 >& do.log & tail -f do.log