src/hg/utils/phyloTrees/49way.dissect.txt 1.1
1.1 2010/04/01 17:04:12 hiram
adding Sheep OviAra to a 49-way tree
Index: src/hg/utils/phyloTrees/49way.dissect.txt
===================================================================
RCS file: src/hg/utils/phyloTrees/49way.dissect.txt
diff -N src/hg/utils/phyloTrees/49way.dissect.txt
--- /dev/null 1 Jan 1970 00:00:00 -0000
+++ src/hg/utils/phyloTrees/49way.dissect.txt 1 Apr 2010 17:04:12 -0000 1.1
@@ -0,0 +1,679 @@
+Node 0:
+ parent = -1
+ lchild = 1
+ rchild = 96
+ name = ''
+ dparent = 0.000000
+
+Node 1:
+ parent = 0
+ lchild = 2
+ rchild = 87
+ name = ''
+ dparent = 0.526688
+
+Node 2:
+ parent = 1
+ lchild = 3
+ rchild = 86
+ name = ''
+ dparent = 0.311354
+
+Node 3:
+ parent = 2
+ lchild = 4
+ rchild = 81
+ name = ''
+ dparent = 0.172371
+
+Node 4:
+ parent = 3
+ lchild = 5
+ rchild = 80
+ name = ''
+ dparent = 0.109504
+
+Node 5:
+ parent = 4
+ lchild = 6
+ rchild = 77
+ name = ''
+ dparent = 0.071664
+
+Node 6:
+ parent = 5
+ lchild = 7
+ rchild = 68
+ name = ''
+ dparent = 0.234728
+
+Node 7:
+ parent = 6
+ lchild = 8
+ rchild = 43
+ name = ''
+ dparent = 0.023664
+
+Node 8:
+ parent = 7
+ lchild = 9
+ rchild = 30
+ name = ''
+ dparent = 0.020593
+
+Node 9:
+ parent = 8
+ lchild = 10
+ rchild = 29
+ name = ''
+ dparent = 0.004937
+
+Node 10:
+ parent = 9
+ lchild = 11
+ rchild = 26
+ name = ''
+ dparent = 0.015494
+
+Node 11:
+ parent = 10
+ lchild = 12
+ rchild = 25
+ name = ''
+ dparent = 0.011062
+
+Node 12:
+ parent = 11
+ lchild = 13
+ rchild = 24
+ name = ''
+ dparent = 0.057590
+
+Node 13:
+ parent = 12
+ lchild = 14
+ rchild = 21
+ name = ''
+ dparent = 0.021965
+
+Node 14:
+ parent = 13
+ lchild = 15
+ rchild = 20
+ name = ''
+ dparent = 0.014340
+
+Node 15:
+ parent = 14
+ lchild = 16
+ rchild = 19
+ name = ''
+ dparent = 0.009680
+
+Node 16:
+ parent = 15
+ lchild = 17
+ rchild = 18
+ name = ''
+ dparent = 0.002250
+
+Node 17:
+ parent = 16
+ lchild = -1
+ rchild = -1
+ name = 'hg19'
+ dparent = 0.006700
+
+Node 18:
+ parent = 16
+ lchild = -1
+ rchild = -1
+ name = 'panTro2'
+ dparent = 0.006667
+
+Node 19:
+ parent = 15
+ lchild = -1
+ rchild = -1
+ name = 'gorGor1'
+ dparent = 0.008825
+
+Node 20:
+ parent = 14
+ lchild = -1
+ rchild = -1
+ name = 'ponAbe2'
+ dparent = 0.018318
+
+Node 21:
+ parent = 13
+ lchild = 22
+ rchild = 23
+ name = ''
+ dparent = 0.029618
+
+Node 22:
+ parent = 21
+ lchild = -1
+ rchild = -1
+ name = 'rheMac2'
+ dparent = 0.007853
+
+Node 23:
+ parent = 21
+ lchild = -1
+ rchild = -1
+ name = 'papHam1'
+ dparent = 0.007637
+
+Node 24:
+ parent = 12
+ lchild = -1
+ rchild = -1
+ name = 'calJac1'
+ dparent = 0.066131
+
+Node 25:
+ parent = 11
+ lchild = -1
+ rchild = -1
+ name = 'tarSyr1'
+ dparent = 0.137823
+
+Node 26:
+ parent = 10
+ lchild = 27
+ rchild = 28
+ name = ''
+ dparent = 0.035463
+
+Node 27:
+ parent = 26
+ lchild = -1
+ rchild = -1
+ name = 'micMur1'
+ dparent = 0.092749
+
+Node 28:
+ parent = 26
+ lchild = -1
+ rchild = -1
+ name = 'otoGar1'
+ dparent = 0.129725
+
+Node 29:
+ parent = 9
+ lchild = -1
+ rchild = -1
+ name = 'tupBel1'
+ dparent = 0.186203
+
+Node 30:
+ parent = 8
+ lchild = 31
+ rchild = 40
+ name = ''
+ dparent = 0.015313
+
+Node 31:
+ parent = 30
+ lchild = 32
+ rchild = 39
+ name = ''
+ dparent = 0.025746
+
+Node 32:
+ parent = 31
+ lchild = 33
+ rchild = 38
+ name = ''
+ dparent = 0.010150
+
+Node 33:
+ parent = 32
+ lchild = 34
+ rchild = 37
+ name = ''
+ dparent = 0.022992
+
+Node 34:
+ parent = 33
+ lchild = 35
+ rchild = 36
+ name = ''
+ dparent = 0.197773
+
+Node 35:
+ parent = 34
+ lchild = -1
+ rchild = -1
+ name = 'mm9'
+ dparent = 0.084509
+
+Node 36:
+ parent = 34
+ lchild = -1
+ rchild = -1
+ name = 'rn4'
+ dparent = 0.091589
+
+Node 37:
+ parent = 33
+ lchild = -1
+ rchild = -1
+ name = 'dipOrd1'
+ dparent = 0.211609
+
+Node 38:
+ parent = 32
+ lchild = -1
+ rchild = -1
+ name = 'cavPor3'
+ dparent = 0.225629
+
+Node 39:
+ parent = 31
+ lchild = -1
+ rchild = -1
+ name = 'speTri1'
+ dparent = 0.148468
+
+Node 40:
+ parent = 30
+ lchild = 41
+ rchild = 42
+ name = ''
+ dparent = 0.101463
+
+Node 41:
+ parent = 40
+ lchild = -1
+ rchild = -1
+ name = 'oryCun2'
+ dparent = 0.114227
+
+Node 42:
+ parent = 40
+ lchild = -1
+ rchild = -1
+ name = 'ochPri2'
+ dparent = 0.201069
+
+Node 43:
+ parent = 7
+ lchild = 44
+ rchild = 65
+ name = ''
+ dparent = 0.021227
+
+Node 44:
+ parent = 43
+ lchild = 45
+ rchild = 54
+ name = ''
+ dparent = 0.011671
+
+Node 45:
+ parent = 44
+ lchild = 46
+ rchild = 47
+ name = ''
+ dparent = 0.020000
+
+Node 46:
+ parent = 45
+ lchild = -1
+ rchild = -1
+ name = 'susScr1'
+ dparent = 0.120000
+
+Node 47:
+ parent = 45
+ lchild = 48
+ rchild = 49
+ name = ''
+ dparent = 0.020335
+
+Node 48:
+ parent = 47
+ lchild = -1
+ rchild = -1
+ name = 'vicPac1'
+ dparent = 0.087275
+
+Node 49:
+ parent = 47
+ lchild = 50
+ rchild = 51
+ name = ''
+ dparent = 0.025153
+
+Node 50:
+ parent = 49
+ lchild = -1
+ rchild = -1
+ name = 'turTru1'
+ dparent = 0.064688
+
+Node 51:
+ parent = 49
+ lchild = 52
+ rchild = 53
+ name = ''
+ dparent = 0.023592
+
+Node 52:
+ parent = 51
+ lchild = -1
+ rchild = -1
+ name = 'oviAra'
+ dparent = 0.100000
+
+Node 53:
+ parent = 51
+ lchild = -1
+ rchild = -1
+ name = 'bosTau4'
+ dparent = 0.100000
+
+Node 54:
+ parent = 44
+ lchild = 55
+ rchild = 62
+ name = ''
+ dparent = 0.004508
+
+Node 55:
+ parent = 54
+ lchild = 56
+ rchild = 57
+ name = ''
+ dparent = 0.006219
+
+Node 56:
+ parent = 55
+ lchild = -1
+ rchild = -1
+ name = 'equCab2'
+ dparent = 0.109397
+
+Node 57:
+ parent = 55
+ lchild = 58
+ rchild = 59
+ name = ''
+ dparent = 0.049845
+
+Node 58:
+ parent = 57
+ lchild = -1
+ rchild = -1
+ name = 'felCat3'
+ dparent = 0.098612
+
+Node 59:
+ parent = 57
+ lchild = 60
+ rchild = 61
+ name = ''
+ dparent = 0.050000
+
+Node 60:
+ parent = 59
+ lchild = -1
+ rchild = -1
+ name = 'canFam2'
+ dparent = 0.052458
+
+Node 61:
+ parent = 59
+ lchild = -1
+ rchild = -1
+ name = 'ailMel1'
+ dparent = 0.050000
+
+Node 62:
+ parent = 54
+ lchild = 63
+ rchild = 64
+ name = ''
+ dparent = 0.033706
+
+Node 63:
+ parent = 62
+ lchild = -1
+ rchild = -1
+ name = 'myoLuc1'
+ dparent = 0.142540
+
+Node 64:
+ parent = 62
+ lchild = -1
+ rchild = -1
+ name = 'pteVam1'
+ dparent = 0.113399
+
+Node 65:
+ parent = 43
+ lchild = 66
+ rchild = 67
+ name = ''
+ dparent = 0.056393
+
+Node 66:
+ parent = 65
+ lchild = -1
+ rchild = -1
+ name = 'eriEur1'
+ dparent = 0.221785
+
+Node 67:
+ parent = 65
+ lchild = -1
+ rchild = -1
+ name = 'sorAra1'
+ dparent = 0.269562
+
+Node 68:
+ parent = 6
+ lchild = 69
+ rchild = 74
+ name = ''
+ dparent = 0.006717
+
+Node 69:
+ parent = 68
+ lchild = 70
+ rchild = 73
+ name = ''
+ dparent = 0.049697
+
+Node 70:
+ parent = 69
+ lchild = 71
+ rchild = 72
+ name = ''
+ dparent = 0.026990
+
+Node 71:
+ parent = 70
+ lchild = -1
+ rchild = -1
+ name = 'loxAfr3'
+ dparent = 0.082242
+
+Node 72:
+ parent = 70
+ lchild = -1
+ rchild = -1
+ name = 'proCap1'
+ dparent = 0.155358
+
+Node 73:
+ parent = 69
+ lchild = -1
+ rchild = -1
+ name = 'echTel1'
+ dparent = 0.245936
+
+Node 74:
+ parent = 68
+ lchild = 75
+ rchild = 76
+ name = ''
+ dparent = 0.053145
+
+Node 75:
+ parent = 74
+ lchild = -1
+ rchild = -1
+ name = 'dasNov2'
+ dparent = 0.116664
+
+Node 76:
+ parent = 74
+ lchild = -1
+ rchild = -1
+ name = 'choHof1'
+ dparent = 0.096357
+
+Node 77:
+ parent = 5
+ lchild = 78
+ rchild = 79
+ name = ''
+ dparent = 0.215100
+
+Node 78:
+ parent = 77
+ lchild = -1
+ rchild = -1
+ name = 'monDom5'
+ dparent = 0.125686
+
+Node 79:
+ parent = 77
+ lchild = -1
+ rchild = -1
+ name = 'macEug1'
+ dparent = 0.122008
+
+Node 80:
+ parent = 4
+ lchild = -1
+ rchild = -1
+ name = 'ornAna1'
+ dparent = 0.456592
+
+Node 81:
+ parent = 3
+ lchild = 82
+ rchild = 85
+ name = ''
+ dparent = 0.105143
+
+Node 82:
+ parent = 81
+ lchild = 83
+ rchild = 84
+ name = ''
+ dparent = 0.199223
+
+Node 83:
+ parent = 82
+ lchild = -1
+ rchild = -1
+ name = 'galGal3'
+ dparent = 0.165536
+
+Node 84:
+ parent = 82
+ lchild = -1
+ rchild = -1
+ name = 'taeGut1'
+ dparent = 0.171542
+
+Node 85:
+ parent = 81
+ lchild = -1
+ rchild = -1
+ name = 'anoCar1'
+ dparent = 0.489241
+
+Node 86:
+ parent = 2
+ lchild = -1
+ rchild = -1
+ name = 'xenTro2'
+ dparent = 0.855573
+
+Node 87:
+ parent = 1
+ lchild = 88
+ rchild = 95
+ name = ''
+ dparent = 0.147949
+
+Node 88:
+ parent = 87
+ lchild = 89
+ rchild = 92
+ name = ''
+ dparent = 0.325640
+
+Node 89:
+ parent = 88
+ lchild = 90
+ rchild = 91
+ name = ''
+ dparent = 0.195181
+
+Node 90:
+ parent = 89
+ lchild = -1
+ rchild = -1
+ name = 'tetNig2'
+ dparent = 0.224159
+
+Node 91:
+ parent = 89
+ lchild = -1
+ rchild = -1
+ name = 'fr2'
+ dparent = 0.203847
+
+Node 92:
+ parent = 88
+ lchild = 93
+ rchild = 94
+ name = ''
+ dparent = 0.059150
+
+Node 93:
+ parent = 92
+ lchild = -1
+ rchild = -1
+ name = 'gasAcu1'
+ dparent = 0.316413
+
+Node 94:
+ parent = 92
+ lchild = -1
+ rchild = -1
+ name = 'oryLat2'
+ dparent = 0.481970
+
+Node 95:
+ parent = 87
+ lchild = -1
+ rchild = -1
+ name = 'danRer6'
+ dparent = 0.730752
+
+Node 96:
+ parent = 0
+ lchild = -1
+ rchild = -1
+ name = 'petMar1'
+ dparent = 0.526688
+