braney: changes by file

review to branch (2010-03-30 to 2010-04-06) v228

• src/hg/encode/encodeValidate/config/cv.ra
  • 1.222 lines changed: 6, context: html, text, full: html, text
    add 20k fragment size
• src/hg/encode/validateFiles/validateFiles.c
  • 1.39 lines changed: 2, context: html, text, full: html, text
    oops, remove BAM from the usage message if USE_BAM not defined
  • 1.38 lines changed: 20, context: html, text, full: html, text
    make BAM testing conditional on USE_BAM
• src/hg/lib/hui.c
  • 1.272 lines changed: 3, context: html, text, full: html, text
    backing out a change Tim made that breaks tracks without views
• src/hg/makeDb/doc/encodeDccHg18/wgEncodeGisRnaSeq.release1.notes.txt
  • 1.1 lines changed: 56, context: html, text, full: html, text
    notes... thanks Krish!
• src/hg/makeDb/trackDb/human/hg18/wgEncodeGisDnaPet.html
  • 1.6 lines changed: 8, context: html, text, full: html, text
    some edits from GIS
• src/hg/makeDb/trackDb/human/hg18/wgEncodeGisPet.html
  • 1.9 lines changed: 84, context: html, text, full: html, text
    some edits from GIS
• src/hg/makeDb/trackDb/human/hg18/wgEncodeGisRnaSeq.html
  • 1.5 lines changed: 8, context: html, text, full: html, text
    take out empty sections
• src/hg/makeDb/trackDb/human/hg18/wgEncodeRikenCage.alpha.ra
  • 1.6 lines changed: 16, context: html, text, full: html, text
    make long labels fit 80 char limit