src/hg/overlapSelect/tests/makefile 1.36
1.36 2010/03/25 16:16:21 markd
fixed stupid bug that caused -idMatch to do the exact opposite of what it was suppose to do
Index: src/hg/overlapSelect/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/overlapSelect/tests/makefile,v
retrieving revision 1.35
retrieving revision 1.36
diff -b -B -U 4 -r1.35 -r1.36
--- src/hg/overlapSelect/tests/makefile 30 Jan 2010 01:14:01 -0000 1.35
+++ src/hg/overlapSelect/tests/makefile 25 Mar 2010 16:16:21 -0000 1.36
@@ -650,9 +650,9 @@
###
# idMatch tests
###
-idMatchTests: psl_idMatch psl_idMatch_non
+idMatchTests: psl_idMatch psl_idMatch_non idMatchSimple idMatchSimpleNon
psl_idMatch: mkout
${OVERSEL} -idMatch -overlapSimilarity=0.8 -dropped=output/$@.drop.psl input/mrna-idMatch1.psl input/mrna-idMatch2.psl output/$@.psl
${DIFF} expected/$@.psl output/$@.psl
@@ -662,8 +662,17 @@
${OVERSEL} -idMatch -overlapSimilarity=0.8 -nonOverlapping -dropped=output/$@.drop.psl input/mrna-idMatch1.psl input/mrna-idMatch2.psl output/$@.psl
${DIFF} expected/$@.psl output/$@.psl
${DIFF} expected/$@.drop.psl output/$@.drop.psl
+idMatchSimple: mkout
+ ${OVERSEL} -idMatch input/idMatchSimple1.gp input/idMatchSimple2.gp output/$@.gp
+ ${DIFF} expected/$@.gp output/$@.gp
+
+idMatchSimpleNon: mkout
+ ${OVERSEL} -idMatch -nonOverlapping input/idMatchSimple1.gp input/idMatchSimple2.gp output/$@.gp
+ ${DIFF} expected/$@.gp output/$@.gp
+
+
###
# whole range overlap
###
rangeTests: range_psl_over_NM_015110gp range_psl_nonover_NM_015110gp \