src/hg/encode/validateFiles/makefile 1.5

1.5 2010/03/23 22:28:52 braney
add a couple of tests for bigWig and BAM
Index: src/hg/encode/validateFiles/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/validateFiles/makefile,v
retrieving revision 1.4
retrieving revision 1.5
diff -b -B -U 1000000 -r1.4 -r1.5
--- src/hg/encode/validateFiles/makefile	15 Oct 2009 19:15:27 -0000	1.4
+++ src/hg/encode/validateFiles/makefile	23 Mar 2010 22:28:52 -0000	1.5
@@ -1,22 +1,26 @@
 include ../../../inc/common.mk
 
 L += $(MYSQLLIBS) -lm
 MYLIBDIR = ../../../lib/${MACHTYPE}
 MYLIBS =  $(MYLIBDIR)/jkhgap.a ${MYLIBDIR}/jkweb.a
 
 O = validateFiles.o
 
 validateFiles: $O ${MYLIBS}
 	${CC} ${COPT} -o ${DESTDIR}${BINDIR}/validateFiles $O ${MYLIBS} $L
 	${STRIP} ${DESTDIR}${BINDIR}/validateFiles${EXE}
 
 clean:
 	rm -f $O
 
 test: 	validateFiles
 	rm -rf output
 	mkdir output
 	-validateFiles -type=tagAlign -genome=/cluster/data/hg18/hg18.2bit  tests/test1.txt > output/test1.out  2>&1 
 	cmp output/test1.out tests/test1.right.txt
 	-validateFiles -nMatch -type=tagAlign -genome=/cluster/data/hg18/hg18.2bit  tests/test2.txt > output/test2.out  2>&1 
 	cmp output/test2.out tests/test2.right.txt
+	validateFiles  -type=BAM -chromDb=hg18  tests/test3.bam > output/test3.out  2>&1 
+	cmp output/test3.out tests/test3.right.txt
+	validateFiles  -type=bigWig -chromDb=hg18  tests/test4.bw > output/test4.out  2>&1 
+	cmp output/test4.out tests/test4.right.txt