galt: changes by commit

branch to review (2010-03-23 to 2010-03-30) v228

• oops fixes 32bit error gff3ToGenePred.c:58: warning: cast from pointer to integer of different size make[3]:
  • src/hg/utils/gff3ToGenePred/gff3ToGenePred.c 1.5 - lines changed: 1, context: html, text, full: html, text
• making makefile ready for HG_APPLIST usage
  • src/hg/ratStuff/mafSpeciesSubset/makefile 1.4 - lines changed: 7, context: html, text, full: html, text
  • src/makefile 1.71 - lines changed: 1, context: html, text, full: html, text
• every makefile should have a clean target
  • src/hg/ratStuff/mafsInRegion/makefile 1.5 - lines changed: 3, context: html, text, full: html, text
• v228 preview
  • src/utils/qa/weeklybld/buildEnv.csh 1.106 - lines changed: 2, context: html, text, full: html, text