pchan: changes by file

review to branch (2010-04-13 to 2010-04-19) v229

• src/hg/archaeStuff/chooseorg/chooseorg.c
  • 1.3 lines changed: 3, context: html, text, full: html, text
    remove hardcoding of centraldb database name
  • 1.2 lines changed: 32, context: html, text, full: html, text
    fixed problem by Andrew H.
• src/hg/archaeStuff/data/Genome-info-euk
  • 1.20 lines changed: 12, context: html, text, full: html, text
    add zebrafish v7
• src/hg/archaeStuff/data/Genome-info-mods
  • 1.99 lines changed: 295, context: html, text, full: html, text
    new archaeal genomes added by Andrew H.; remove old Geobacter genomes and replace with new ones
• src/hg/archaeStuff/scripts/make-browser-2.0
  • 1.55 lines changed: 32, context: html, text, full: html, text
    add resetorder, synctable, and synctrackfile options
• src/hg/archaeStuff/scripts/archaeBrowser/CDS.pm
  • 1.28 lines changed: 11, context: html, text, full: html, text
    fixed kegg data retrieval by Andrew H.
• src/hg/archaeStuff/scripts/archaeBrowser/OrganismDb.pm
  • 1.54 lines changed: 205, context: html, text, full: html, text
    add resetorder, synctable, and synctrackfile options
• src/hg/archaeStuff/scripts/archaeBrowser/ncRNA.pm
  • 1.28 lines changed: 11, context: html, text, full: html, text
    do not write gtrnadb urls if not exist
• src/hg/hgc/hgc.c
  • 1.1613 lines changed: 14, context: html, text, full: html, text
    move LOWELAB code section close to the top of the if statement in doMiddle() to avoid function calling conflicts
• src/hg/hgc/lowelab.c
  • 1.49 lines changed: 34, context: html, text, full: html, text
    change code to display tRNA image on detail page
• src/hg/js/jquery.autocomplete.lowe.js
  • 1.1 lines changed: 808, context: html, text, full: html, text
    created by Andrew H. for autocomplete genome box
• src/hg/js/loweautocomplete.js
  • 1.2 lines changed: 2, context: html, text, full: html, text
    fixed tooltip problem by Andrew H.
• src/hg/js/lowetooltip.js
  • 1.4 lines changed: 263, context: html, text, full: html, text
    fixed tooltip problem by Andrew H.