tdreszer: changes by commit

review to branch (2010-04-13 to 2010-04-19) v229

• Fixed bug in formatted metadata lines requesting a delete
  • src/hg/lib/metaTbl.c 1.12 - lines changed: 8, context: html, text, full: html, text
• The metaTbl has been renamed 'mdb' and objType has been dropped.
  • src/hg/lib/mdb.as 1.1 - lines changed: 8, context: html, text, full: html, text
  • src/hg/lib/mdb.c 1.1 - lines changed: 1867, context: html, text, full: html, text
  • src/hg/lib/mdb.sql 1.1 - lines changed: 18, context: html, text, full: html, text
• The metaTbl is now the 'mdb'.
  • src/hg/lib/hui.c 1.275 - lines changed: 14, context: html, text, full: html, text
• Removed obsolete old style metadata code
  • src/hg/inc/trackDb.h 1.56 - lines changed: 23, context: html, text, full: html, text
  • src/hg/lib/trackDbCustom.c 1.84 - lines changed: 86, context: html, text, full: html, text
• Renamed metaTbl to 'mdb' and eliminated objType
  • src/hg/inc/mdb.h 1.1 - lines changed: 293, context: html, text, full: html, text
• Renamed metaTbl to 'mdb' and eliminated objType.
  • src/hg/lib/makefile 1.407 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/mdbUpdate/makefile 1.1 - lines changed: 31, context: html, text, full: html, text
  • src/hg/makeDb/mdbUpdate/mdbPrint.c 1.1 - lines changed: 204, context: html, text, full: html, text
  • src/hg/makeDb/mdbUpdate/mdbUpdate.c 1.1 - lines changed: 291, context: html, text, full: html, text
• Renamed metaTbl to 'mdb'.
  • src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl 1.33 - lines changed: 13, context: html, text, full: html, text
  • src/hg/hgc/hgc.c 1.1612 - lines changed: 1, context: html, text, full: html, text
• Removing as part of rename from metaTbl to mdb
  • src/hg/makeDb/trackDb/human/hg18/metaBroad.ra 1.2 - lines changed: 3094, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaOpenChrom.ra 1.2 - lines changed: 11274, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/metaYaleTfbs.ra 1.2 - lines changed: 21609, context: html, text, full: html, text
• These 3 have been moved from metaTbl to 'mdb'.
  • src/hg/makeDb/trackDb/human/hg18/mdbHaibTfbs.ra 1.1 - lines changed: 10291, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/mdbOpenChrom.ra 1.1 - lines changed: 11274, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg18/mdbYaleTfbs.ra 1.1 - lines changed: 21609, context: html, text, full: html, text
• Initial checkin of mdb style metadata for Broad Histone
  • src/hg/makeDb/trackDb/human/hg18/mdbBroad.ra 1.1 - lines changed: 10066, context: html, text, full: html, text
• More Yale Short labels for Katrina
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra 1.948 - lines changed: 28, context: html, text, full: html, text
• Fixed one lab that was YaUCDle and stripped out quotes
  • src/hg/makeDb/trackDb/human/hg18/mdbYaleTfbs.ra 1.2 - lines changed: 1819, context: html, text, full: html, text
• Stripping quotes out of mdb means adding them in here
  • src/hg/encode/encodeDownloadsPage/encodeDownloadsPage.pl 1.34 - lines changed: 4, context: html, text, full: html, text
• Added stripEnclosingQuotes()
  • src/inc/common.h 1.170 - lines changed: 6, context: html, text, full: html, text
  • src/lib/common.c 1.147 - lines changed: 22, context: html, text, full: html, text
• Strip enclosing quotes before updating a val
  • src/hg/lib/mdb.c 1.2 - lines changed: 2, context: html, text, full: html, text
• Fix errAbort with too many params
  • src/hg/makeDb/mdbUpdate/mdbUpdate.c 1.2 - lines changed: 1, context: html, text, full: html, text
• Finally have the RNA doc from Yale
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeYaleRNAseq.html 1.2 - lines changed: 87, context: html, text, full: html, text
• Limit to 800px, because the massive matrix makes everything too wide.
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeYaleChIPseq.html 1.49 - lines changed: 2, context: html, text, full: html, text
• Fix names in a reference
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeYaleRNAseq.html 1.3 - lines changed: 2, context: html, text, full: html, text
• Fix ra file indenting
  • src/hg/makeDb/trackDb/human/hg18/mdbYaleTfbs.ra 1.3 - lines changed: 19462, context: html, text, full: html, text
• Fixed ra file indenting.
  • src/hg/lib/mdb.c 1.3 - lines changed: 1, context: html, text, full: html, text
• Fixed ra indenting and quatation marks
  • src/hg/makeDb/trackDb/human/hg18/mdbBroad.ra 1.2 - lines changed: 8968, context: html, text, full: html, text
• Fixed indenting and quotations
  • src/hg/makeDb/trackDb/human/hg18/mdbOpenChrom.ra 1.2 - lines changed: 10044, context: html, text, full: html, text
• Fixed indent and quotations
  • src/hg/makeDb/trackDb/human/hg18/mdbHaibTfbs.ra 1.2 - lines changed: 9297, context: html, text, full: html, text