src/hg/encode/encodeCharts/encodeTimeline.py 1.2
1.2 2010/04/07 23:13:58 bsuh
Script now specifies path to 2.6 version of Python. Added stuff to make it a cgi-bin script
Index: src/hg/encode/encodeCharts/encodeTimeline.py
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeCharts/encodeTimeline.py,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/encode/encodeCharts/encodeTimeline.py 7 Apr 2010 19:10:30 -0000 1.1
+++ src/hg/encode/encodeCharts/encodeTimeline.py 7 Apr 2010 23:13:58 -0000 1.2
@@ -1,13 +1,16 @@
-#!/usr/bin/env python
+#!/hive/groups/recon/local/bin/python
+import cgitb
import datetime
import os
import re
import sys
import gviz_api
+cgitb.enable()
+
# Directory containing the report files
reportDir = "/hive/groups/encode/dcc/reports"
# File listing the important events and dates
@@ -42,9 +45,9 @@
if currentFile == "NULL":
print >> sys.stderr, "Error: Can't find a report file in dir '%s'" % reportDir
sys.exit(-1)
- return currentFile
+ return currentFile, currentDate
# Read and parse the important dates file
# Return a dict where key = event date and value = event label
def readImportantDatesFile (file):
@@ -92,9 +95,9 @@
importantDateHash = readImportantDatesFile(importantDatesFile)
submitHash = {}
releaseHash = {}
- currentFile = getRecentReport(reportDir)
+ currentFile, currentDate = getRecentReport(reportDir)
fullFilePath = reportDir + "/" + currentFile
try:
f = open(fullFilePath, "r")
@@ -167,9 +170,9 @@
array.append(submitSum)
array.append(annotText)
dataArray.append(array)
- return dataArray
+ return dataArray, currentDate
def main():
# Headers for the columns in the data matrix
description = [("date", "date"), ("release", "number"), ("release_cumul", "number"), ("submit", "number"), ("submit_cumul", "number"), ("events", "string") ]
@@ -177,17 +180,21 @@
# Create the data table
data_table = gviz_api.DataTable(description)
# Create and load the matrix
- matrix = getDataArray(reportDir, importantDatesFile)
+ matrix, reportDate = getDataArray(reportDir, importantDatesFile)
data_table.LoadData(matrix)
+ reportDate = str(reportDate)
+ reportDateObj = datetime.date(int(reportDate[0:4]), int(reportDate[4:6]), int(reportDate[6:8]))
+ dateStamp = reportDateObj.strftime("%b %d, %Y")
+
# Convert to JavaScript code
jscode = data_table.ToJSCode("jscode_data")
# Commented out but could serve this page dynamically
-# print "Content-type: text/html"
-# print
+ print "Content-type: text/html"
+ print
# Print out the webpage
print page_template % vars()
@@ -212,8 +219,9 @@
<title>ENCODE Cumulative Submit and Release Timeline</title>
</head>
<body>
+ <h2>ENCODE Cumulative Submit and Release Timeline <br><font size="-1">(Report Date: %(dateStamp)s)</font></h2>
<div id='chart_div' style='width: 854px; height: 480px;'></div>
</body>
</html>
"""