src/hg/instinct/raToDb/raDb.sql 1.2
1.2 2010/04/09 22:58:36 jsanborn
updated
Index: src/hg/instinct/raToDb/raDb.sql
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/instinct/raToDb/raDb.sql,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/instinct/raToDb/raDb.sql 9 Apr 2010 19:31:15 -0000 1.1
+++ src/hg/instinct/raToDb/raDb.sql 9 Apr 2010 22:58:36 -0000 1.2
@@ -1,39 +1,41 @@
-# ra.sql was originally generated by the autoSql program, which also
-# generated ra.c and ra.h. This creates the database representation of
+# raDb.sql was originally generated by the autoSql program, which also
+# generated raDb.c and raDb.h. This creates the database representation of
# an object which can be loaded and saved from RAM in a fairly
# automatic way.
#ra info
-CREATE TABLE ra (
+CREATE TABLE raDb (
id int unsigned, # Unique id
name varchar(255), # Table name for genomic data
accessTable varchar(255), # Down-sampled table
shortLabel varchar(255), # Short label
longLabel varchar(255), # Long label
- group varchar(255), # Group for organization
+ expCount int unsigned, # Number of samples
+ groupName varchar(255), # Group name
raFile varchar(255), # RA file containing clinical info
patDb varchar(255), # Clinical info db
sampleField varchar(255), # Sample field
patTable varchar(255), # Patient to sample mapping
patField varchar(255), # Patient field
aliasTable varchar(255), # Probe to gene mapping
+ displayNameTable varchar(255), # Display names for aliases
dataType varchar(255), # data type (bed 15)
platform varchar(255), # Expression, SNP, etc.
expScale float, # Scaling factor
gainFull float, # Gain Full
gainSet float, # Gain Set
type varchar(255), # Unknown
visibility varchar(255), # Default visibility
priority float, # Priority for sorting
url varchar(255), # Pubmed URL
security varchar(255), # Security setting (public, private)
local_url varchar(255), # URL to local details page
profile varchar(255), # Database profile
wrangler varchar(255), # Wrangler
citation varchar(255), # Citation
article_title longblob, # Title of publication
author_list longblob, # Author list
wrangling_procedure longblob, # Wrangling
#Indices
PRIMARY KEY(id)
);