src/hg/encode/DAFs/GisChiaPet.daf 1.1
1.1 2010/04/27 17:33:48 kent
First cut of data agreement for ChIA-PET
Index: src/hg/encode/DAFs/GisChiaPet.daf
===================================================================
RCS file: src/hg/encode/DAFs/GisChiaPet.daf
diff -N src/hg/encode/DAFs/GisChiaPet.daf
--- /dev/null 1 Jan 1970 00:00:00 -0000
+++ src/hg/encode/DAFs/GisChiaPet.daf 27 Apr 2010 17:33:48 -0000 1.1
@@ -0,0 +1,35 @@
+# Data Agreement File for Genome Institute of Singapore ChIA-PET experiments $Revision$
+
+# Lab and general info
+grant Ruan
+lab Gis
+dataType ChiaPet
+variables cell, antibody
+compositeSuffix ChiaPet
+assembly hg18
+dafVersion 2.0
+validationSettings validateFiles.fastq:quick=10;validateFiles.bam:quick=10
+
+# Track/view definition
+view Interactions
+longLabelPrefix ChIA-PET Interactions
+type crossChrom
+hasReplicates no
+required no
+
+view IntraInteractions
+longLabelPrefix ChIA-PET Same Chromosome Interactions
+type bed 12
+hasReplicates no
+required no
+
+view Alignments
+longLabelPrefix ChIA-PET Alignments
+type bam
+hasReplicates no
+required yes
+
+view RawData
+type fastq
+hasReplicates no
+required yes