src/hg/encode/DAFs/GisChiaPet.daf 1.1

1.1 2010/04/27 17:33:48 kent
First cut of data agreement for ChIA-PET
Index: src/hg/encode/DAFs/GisChiaPet.daf
===================================================================
RCS file: src/hg/encode/DAFs/GisChiaPet.daf
diff -N src/hg/encode/DAFs/GisChiaPet.daf
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/encode/DAFs/GisChiaPet.daf	27 Apr 2010 17:33:48 -0000	1.1
@@ -0,0 +1,35 @@
+# Data Agreement File for Genome Institute of Singapore ChIA-PET experiments  $Revision$
+
+# Lab and general info
+grant             Ruan
+lab               Gis
+dataType          ChiaPet
+variables         cell, antibody
+compositeSuffix   ChiaPet
+assembly          hg18
+dafVersion        2.0
+validationSettings validateFiles.fastq:quick=10;validateFiles.bam:quick=10
+
+# Track/view definition
+view             Interactions
+longLabelPrefix  ChIA-PET Interactions
+type             crossChrom
+hasReplicates    no
+required         no
+
+view             IntraInteractions
+longLabelPrefix  ChIA-PET Same Chromosome Interactions
+type             bed 12
+hasReplicates    no
+required         no
+
+view             Alignments
+longLabelPrefix  ChIA-PET Alignments
+type             bam
+hasReplicates    no
+required         yes
+
+view             RawData
+type             fastq
+hasReplicates    no
+required         yes