src/hg/makeDb/doc/hg18.txt 1.418

Index: src/hg/makeDb/doc/hg18.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg18.txt,v
retrieving revision 1.417
retrieving revision 1.418
diff -b -B -U 4 -r1.417 -r1.418
--- src/hg/makeDb/doc/hg18.txt	12 May 2010 23:46:11 -0000	1.417
+++ src/hg/makeDb/doc/hg18.txt	13 May 2010 00:13:15 -0000	1.418
@@ -29699,8 +29699,10 @@
 # added downloads for the bigWig data files.
 # 2010-04-28 Received new data from Thomas Derrien. Downloaded data and 
 # added it to /gbdb/. A bug was found in a library used by bedGraphToBigWig 
 # so sent a new binary to data providers and they re-created the bigWig files. 
+# 2010-05-12. Updated downloads for the new data files.
+
      mkdir -p /hive/data/genomes/hg18/bed/crgMapability
      cd /hive/data/genomes/hg18/bed/crgMapability
 cat << 'EOF' > temp
 #!/bin/tcsh -ef
@@ -29819,8 +29821,18 @@
         echo $nf
         rm /gbdb/hg18/bbi/${nf}
         ln -s `pwd`/${f} /gbdb/hg18/bbi/${nf}
      end
+     # 2010-05-12
+     # Updated downloads for the new data files.
+     cd /usr/local/apache/htdocs/goldenPath/hg18/encodeDCC/wgEncodeMapability
+     rm wgEncodeCrg*
+     cp -p /gbdb/hg18/bbi/wgEncodeCrg*.bw .
+     gzip wgEncodeCrg*.bw
+     rm md5sum.txt
+     # Run encodeDownloadsPage.pl to generate the index page for downloads
+     # and generate new md5sum.txt file for the data.
+     encodeDownloadsPage.pl -checksum -db=hg19 index.html
 
 #####################################################################
 # tRNAs track (2010-03-12, Fan RE-BUILT)
 #