src/hg/makeDb/doc/hg19.txt 1.109

Index: src/hg/makeDb/doc/hg19.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg19.txt,v
retrieving revision 1.108
retrieving revision 1.109
diff -b -B -U 4 -r1.108 -r1.109
--- src/hg/makeDb/doc/hg19.txt	12 May 2010 23:46:11 -0000	1.108
+++ src/hg/makeDb/doc/hg19.txt	13 May 2010 00:51:18 -0000	1.109
@@ -8580,8 +8580,10 @@
 # sent a new binary to data providers and they re-created the bigWig files. 
 # 2010-05-11. All ENCODE tracks need to be preceded by the wgEncode prefix now
 # on all assemblies. Update the file names in /gbdb/hg19/bbi and the 
 # table names. (hartera)
+# 2010-05-12. Added 24mer track to trackDb entry. Updated downloads with the
+# new data.
     mkdir -p /hive/data/genomes/hg19/bed/crgMapability
     cd /hive/data/genomes/hg19/bed/crgMapability
 cat << 'EOF' > temp
 #!/bin/tcsh -ef
@@ -8740,8 +8742,23 @@
      # Then change the subtrack names to match the new table names in
      # kent/src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra as 
      # the contents of trackDb.enc.ra has been moved there. 
 
+     # 2010-05-12
+     # Added subtrack for the new 24mer table. 
+     # Updated the downloads for the new data.
+     cd /usr/local/apache/htdocs/goldenPath/hg19/encodeDCC
+     # Change name of downloads directory to be consistent with the 
+     # new track name.
+     mv encMapability wgEncodeMapability
+     cd wgEncodeMapability
+     rm encCrg* md5sum.txt
+     cp -p /gbdb/hg19/bbi/wgEncodeCrg*.bw .
+     gzip wgEncodeCrg*.bw
+     # Then run encodeDownloadsPage.pl script to update the index.html and
+     # regenerate the md5sum.txt file.
+     encodeDownloadsPage.pl -db=hg19 -checksum index.html 
+ 
 #####################################################################
 # tRNAs track (2010-01-13, Fan DONE)
 # tRNAs track (2010-03-10, Fan RE-BUILT WITH UPDATED DATA FROM TODD LOWE)
 #