src/hg/instinct/extractData/transpose.py 1.2

1.2 2010/05/10 09:04:51 jzhu
Index: src/hg/instinct/extractData/transpose.py
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/instinct/extractData/transpose.py,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/instinct/extractData/transpose.py	10 May 2010 08:49:57 -0000	1.1
+++ src/hg/instinct/extractData/transpose.py	10 May 2010 09:04:51 -0000	1.2
@@ -1,32 +1,32 @@
 import string,sys
 
 if (len(sys.argv[:]))!=3:
     print "python transpose.py extractDataIn transposeOut-Paradigm"
-    print "       the output file skip the probe column"
+    print "       the output file skips the probe column"
     sys.exit()
 
 fin= open(sys.argv[1],'r')
 fout= open(sys.argv[2],'w')
 
 matrix=[]
 for line in fin.readlines():
     data = string.split(line[:-1],'\t')
     matrix.append(data)
 
 row=len(matrix)
 col= len(matrix[0])
 
 #header
 fout.write("ID"+'\t')
 for i in range (1, row-1):
     fout.write(matrix[i][0]+'\t')
 fout.write(matrix[i+1][0]+'\n')
 
 #body
 for j in range (2,col):
     for i in range(0, row-1):
         fout.write(matrix[i][j]+'\t')
     fout.write(matrix[i+1][j]+'\n')
 
 fin.close()
 fout.close()