braney: changes by file

branch to review (2010-05-04 to 2010-05-11) v231

• src/hg/encode/validateFiles/validateFiles.c
  • 1.41 lines changed: 135, context: html, text, full: html, text
    handle indels
• src/hg/makeDb/doc/felCatV17e.txt
  • 1.12 lines changed: 26, context: html, text, full: html, text
    human proteins
  • 1.11 lines changed: 160, context: html, text, full: html, text
    starting human proteins
• src/hg/makeDb/schema/all.joiner
  • 1.794 lines changed: 2, context: html, text, full: html, text
    add new cat to human proteins
• src/hg/makeDb/trackDb/tagTypes.tab
  • 1.18 lines changed: 1, context: html, text, full: html, text
    add broadPeak to types acceptable to maxItems
  • 1.14 lines changed: 2, context: html, text, full: html, text
    add a couple of variables used in the Gencode track
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.964 lines changed: 1, context: html, text, full: html, text
    set maxItems to 20. This resolves the 32,000 bit image problem
  • 1.962 lines changed: 9, context: html, text, full: html, text
    some Orchid track changes
• src/hg/makeDb/trackDb/human/hg18/wgEncodeBuOrchid.html
  • 1.1 lines changed: 138, context: html, text, full: html, text
    track description
• src/hg/makeDb/trackDb/human/hg19/trackDb.enc.ra
  • 1.16 lines changed: 1, context: html, text, full: html, text
    take out misspelling
• src/hg/oneShot/timeGifPng/timeGifPng.c
  • 1.2 lines changed: 29, context: html, text, full: html, text
    some changes