tdreszer: changes by file

branch to review (2010-05-04 to 2010-05-11) v231

• src/hg/encode/encodeValidate/config/cv.ra
  • 1.237 lines changed: 11, context: html, text, full: html, text
    Added 2 new protocols for HAIB TFBS
• src/hg/js/hgTracks.js
  • 1.67 lines changed: 1, context: html, text, full: html, text
    Got tired of seeing the error of 'hgTracksInitTracks not defined'.
• src/hg/lib/mdb.c
  • 1.7 lines changed: 8, context: html, text, full: html, text
    Improve multi-var query
• src/hg/makeDb/doc/encodeDccHg18/yaleChIPseq.release3.notes.txt
  • 1.2 lines changed: 6, context: html, text, full: html, text
    Two files were accidentally listed as deprecated but are actually untouched
• src/hg/makeDb/trackDb/human/hg18/mdbBroad.ra
  • 1.4 lines changed: 11164, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbHaibTfbs.ra
  • 1.9 lines changed: 16385, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbOpenChrom.ra
  • 1.5 lines changed: 12139, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbUwDgf.ra
  • 1.2 lines changed: 469, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbUwDnase.ra
  • 1.2 lines changed: 7608, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbUwHist.ra
  • 1.3 lines changed: 12796, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/mdbYaleTfbs.ra
  • 1.9 lines changed: 24601, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
  • 1.8 lines changed: 45, context: html, text, full: html, text
    Added 2 missing fastqs
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeBroadChipSeq.ra
  • 1.1 lines changed: 11164, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeChromatinMap.ra
  • 1.1 lines changed: 12139, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeHudsonalphaChipSeq.ra
  • 1.1 lines changed: 16385, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeHudsonalphaRnaSeq.ra
  • 1.2 lines changed: 1, context: html, text, full: html, text
    Magic needed fixing
  • 1.1 lines changed: 279, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeUwChIPSeq.ra
  • 1.1 lines changed: 12796, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeUwDGF.ra
  • 1.1 lines changed: 469, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeUwDnaseSeq.ra
  • 1.1 lines changed: 7608, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg18/metaDb/wgEncodeYaleChIPseq.ra
  • 1.1 lines changed: 24601, context: html, text, full: html, text
    Moved all of this meadata to metaDb subdir and named by composite
• src/hg/makeDb/trackDb/human/hg19/mdbHaibTfbs.ra
  • 1.3 lines changed: 1169, context: html, text, full: html, text
    Move 3 mdb RA files to metaDb subdir
• src/hg/makeDb/trackDb/human/hg19/metaDb/wgEncodeHaibTfbs.ra
  • 1.1 lines changed: 1169, context: html, text, full: html, text
    Move 3 mdb RA files to metaDb subdir
• src/hg/makeDb/trackDb/human/hg19/metaDb/wgEncodeSydhHistone.ra
  • 1.1 lines changed: 467, context: html, text, full: html, text
    Move 3 mdb RA files to metaDb subdir
• src/hg/makeDb/trackDb/human/hg19/metaDb/wgEncodeSydhTfbs.ra
  • 1.1 lines changed: 2505, context: html, text, full: html, text
    Move 3 mdb RA files to metaDb subdir
• src/hg/makeDb/trackDb/mouse/mm9/mdbSydhTfbs.txt
  • 1.2 lines changed: 1, context: html, text, full: html, text
    Moved to metaDb subdir
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/wgEncodeSydhTfbs.ra
  • 1.1 lines changed: 572, context: html, text, full: html, text
    Initial check in of Cricket's SYDH TFBS on mm9