src/utils/qa/makeUniProtFile.csh 1.8
1.8 2010/05/21 23:52:35 vanessa
changed the path names for the htdoc reorganization to htdoc-genecats and htdoc-hgdownload and changed the appropriate urls
Index: src/utils/qa/makeUniProtFile.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/makeUniProtFile.csh,v
retrieving revision 1.7
retrieving revision 1.8
diff -b -B -U 4 -r1.7 -r1.8
--- src/utils/qa/makeUniProtFile.csh 8 Jun 2009 22:57:12 -0000 1.7
+++ src/utils/qa/makeUniProtFile.csh 21 May 2010 23:52:35 -0000 1.8
@@ -93,10 +93,10 @@
# make sure there is only one Gene ID - UniProt ID pair
sort -k1,1 -u $db.rawDataForUniProt.plus > $db.uniProtToUcscGenes.txt
# make the new directory and copy the file there
-mkdir -p /usr/local/apache/htdocs/goldenPath/$db/UCSCGenes
-cp $db.uniProtToUcscGenes.txt /usr/local/apache/htdocs/goldenPath/$db/UCSCGenes/uniProtToUcscGenes.txt
+mkdir -p /usr/local/apache/htdocs-hgdownload/goldenPath/$db/UCSCGenes
+cp $db.uniProtToUcscGenes.txt /usr/local/apache/htdocs-hgdownload/goldenPath/$db/UCSCGenes/uniProtToUcscGenes.txt
# how big is the file
set num=`wc -l $db.uniProtToUcscGenes.txt | awk '{print $1}'`
@@ -105,9 +105,9 @@
echo "Here's a sample of the ${num}-line file you just created"
echo " (expect: UniProtId ucscGeneId orgName)"
head $db.uniProtToUcscGenes.txt
echo " \nAsk for a push of your new file to hgdownload:\n"
-echo " /usr/local/apache/htdocs/goldenPath/$db/UCSCGenes/uniProtToUcscGenes.txt"
+echo " /usr/local/apache/htdocs-hgdownload/goldenPath/$db/UCSCGenes/uniProtToUcscGenes.txt"
# clean up old files (except the real one)
cleanup:
rm -f $db.rawDataForUniProt*