src/hg/makeDb/trackDb/gap.html 1.8
1.8 2010/05/20 18:43:21 hiram
Adding t2g html page, fix error in gap.html and reset labels for t2g
Index: src/hg/makeDb/trackDb/gap.html
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RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/gap.html,v
retrieving revision 1.7
retrieving revision 1.8
diff -b -B -U 1000000 -r1.7 -r1.8
--- src/hg/makeDb/trackDb/gap.html 19 Jul 2004 17:43:46 -0000 1.7
+++ src/hg/makeDb/trackDb/gap.html 20 May 2010 18:43:21 -0000 1.8
@@ -1,16 +1,17 @@
<H2>Description</H2>
+<P>
This track depicts gaps in the assembly. These gaps - with the
exception of intractable heterochromatic gaps - will be closed during the
finishing process.
</P><P>
Gaps are represented as black boxes in this track.
If the relative order and orientation of the contigs on either side
of the gap is known, it is a <em>bridged</em> gap and a white line is drawn
through the black box representing the gap.
</P>
<P>This assembly contains the following principal types of gaps:
<UL>
<LI><B>Fragment</B> - gaps between the contigs of a draft clone.
(In this context, a contig is a set of overlapping sequence reads.)
<LI><B>Clone</B> - gaps between clones in the same map contig.
</UL></P>