src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg 1.6

Index: src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg,v
retrieving revision 1.5
retrieving revision 1.6
diff -b -B -U 4 -r1.5 -r1.6
--- src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg	13 May 2010 09:15:46 -0000	1.5
+++ src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg	3 Jun 2010 00:04:58 -0000	1.6
@@ -329,9 +329,11 @@
         my $e = getSameMetadata($expVars[$i], @currentMetadata);
         # output the base exp var value
         print "!Sample_characteristics = $expVars[$i]: $e" . "\n";
         # if the currnet exp var is none
-        if ($currentExpVars[$i] eq "None" or $currentExpVars[$i] eq "none") {
+        if ($currentExpVars[$i] eq "None" or
+            $currentExpVars[$i] eq "none" or
+            ($expVars[$i] eq "antibody" and $currentExpVars[$i] eq "Input")) {
             # do nothing more
         } else {
             # otherwise output the fields given by %expVarDetails from the cv.ra
             my %cvType = %{$cvTerms{$expVarCVMapper{$expVars[$i]}}};
@@ -380,7 +382,5 @@
             ++$supplementCount;
         }
     }
     print "\n";
-    
-    exit;
 }