src/utils/pslLiftSubrangeBlat/tests/makefile 1.1

1.1 2010/06/02 07:07:45 markd
added program to lift blat subrange queries
Index: src/utils/pslLiftSubrangeBlat/tests/makefile
===================================================================
RCS file: src/utils/pslLiftSubrangeBlat/tests/makefile
diff -N src/utils/pslLiftSubrangeBlat/tests/makefile
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/utils/pslLiftSubrangeBlat/tests/makefile	2 Jun 2010 07:07:45 -0000	1.1
@@ -0,0 +1,28 @@
+include ../../../inc/common.mk
+pslLiftSubrangeBlat = ${BINDIR}/pslLiftSubrangeBlat
+
+all:
+
+test: tSubRangeTest qSubRangeTest qtSubRangeTest
+
+tSubRangeTest: mkdirs
+	${pslLiftSubrangeBlat} -tSizes=input/tSubrange.tsizes input/tSubrange.psl output/$@.psl
+	pslCheck -verbose=0 output/$@.psl
+	diff expected/$@.psl output/$@.psl
+
+qSubRangeTest: mkdirs
+	${pslLiftSubrangeBlat} -qSizes=input/tSubrange.tsizes input/qSubrange.psl output/$@.psl
+	pslCheck -verbose=0 output/$@.psl
+	diff expected/$@.psl output/$@.psl
+
+qtSubRangeTest: mkdirs
+	${pslLiftSubrangeBlat} -qSizes=input/qtSubrange.sizes -tSizes=input/qtSubrange.sizes input/qtSubrange.psl output/$@.psl
+	pslCheck -verbose=0 output/$@.psl
+	diff expected/$@.psl output/$@.psl
+
+clean::
+	rm -rf output
+
+mkdirs:
+	@${MKDIR} output
+