markd: changes by commit

review to branch (2010-06-01 to 2010-06-07) v233

• added program to lift blat subrange queries
  • src/utils/makefile 1.77 - lines changed: 2, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/makefile 1.1 - lines changed: 22, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/pslLiftSubrangeBlat.c 1.1 - lines changed: 131, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/expected/qSubRangeTest.psl 1.1 - lines changed: 4, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/expected/qtSubRangeTest.psl 1.1 - lines changed: 3, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/expected/tSubRangeTest.psl 1.1 - lines changed: 4, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/qSubrange.psl 1.1 - lines changed: 4, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/qSubrange.qsizes 1.1 - lines changed: 1, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/qtSubrange.psl 1.1 - lines changed: 3, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/qtSubrange.qsizes 1.1 - lines changed: 1, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/qtSubrange.sizes 1.1 - lines changed: 2, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/tSubrange.psl 1.1 - lines changed: 4, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/input/tSubrange.tsizes 1.1 - lines changed: 1, context: html, text, full: html, text
  • src/utils/pslLiftSubrangeBlat/tests/makefile 1.1 - lines changed: 28, context: html, text, full: html, text
• added import of new tables from ncbi
  • src/hg/makeDb/genbank/src/ccds/createKeys.sql 1.6 - lines changed: 7, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/ccds/createTables.sql 1.7 - lines changed: 60, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/ccds/ncbiSql/convertCreateTables 1.5 - lines changed: 1, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/ccds/ncbiSql/createKeys.sql 1.6 - lines changed: 57, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/ccds/ncbiSql/createTables.sql 1.7 - lines changed: 55, context: html, text, full: html, text