src/hg/encode/encodeValidate/makefile 1.19

1.19 2010/05/28 19:43:41 krish
fixed bug where BAM validator was breaking the cell CV term validator
Index: src/hg/encode/encodeValidate/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/encodeValidate/makefile,v
retrieving revision 1.18
retrieving revision 1.19
diff -b -B -U 1000000 -r1.18 -r1.19
--- src/hg/encode/encodeValidate/makefile	29 Aug 2009 18:05:22 -0000	1.18
+++ src/hg/encode/encodeValidate/makefile	28 May 2010 19:43:41 -0000	1.19
@@ -1,61 +1,62 @@
 # Build encode validator
 
 include ../../../inc/common.mk
 
 SCRIPT_FILES = \
 	doEncodeValidate.pl
 CONFIG_FILES = \
 	fields.ra \
 	labs.ra \
 	cv.ra \
-	hg18_chromInfo.txt
+	hg18_chromInfo.txt \
+        expVars.ra
 
 CV = cv.ra
 
 PIPELINE_PATH=/hive/groups/encode/dcc/pipeline
 CONFIG_DIR = ${PIPELINE_PATH}/${PIPELINE_DIR}/config
 
 all:
 	@${MAKE} --no-print-directory SCRIPTS=${HOME}/bin/scripts PIPELINE_DIR=encpipeline_${USER} scripts config cgi
 
 alpha:
 	@${MAKE} --no-print-directory SCRIPTS=${SCRIPTS} PIPELINE_DIR=encpipeline_beta scripts config install-cgi
 
 install:
 	@${MAKE} --no-print-directory SCRIPTS=${ENCODE_PIPELINE_BIN} PIPELINE_DIR=encpipeline_prod scripts config install-cgi
 
 # recursive targets, arguments:
 #   SCRIPTS PIPELINE_DIR
 
 scripts: ${SCRIPT_FILES:%=${SCRIPTS}/%}
 
 ${SCRIPTS}/%: %
 	@mkdir -p $(dir $@)
 	chmod +x $<
 	perl -c $< 2>&1
 	cp -p $< $@.tmp
 	mv -f $@.tmp $@
 
 config: ${CONFIG_FILES:%=${CONFIG_DIR}/%}
 
 install-cgi:
 	@if [ ! -d "${CGI_BIN}/encode" ]; then \
 		${MKDIR} ${CGI_BIN}/encode; \
 	fi
 	rm -f ${CGI_BIN}/encode/${CV}
 	cp -p config/${CV} ${CGI_BIN}/encode/${CV}
 
 cgi:
 	@if [ ! -d "${CGI_BIN}-${USER}/encode" ]; then \
 		${MKDIR} ${CGI_BIN}-${USER}/encode; \
 	fi
 	rm -f ${CGI_BIN}-${USER}/encode/${CV}
 	cp -p config/${CV} ${CGI_BIN}-${USER}/encode/${CV}
 
 ${CONFIG_DIR}/%: config/%
 	@mkdir -p $(dir $@)
 	cp -p $< $@.tmp
 	mv -f $@.tmp $@
 
 test:
 	cd test && ${MAKE}