src/hg/makeDb/trackDb/trackDb.nt.ra 1.2

1.2 2010/05/28 23:22:56 rhead
Adding dimensions to tracks that were getting a (null) label in hgTrackUi on the sortOrder. According to Brian, this problem is occurring in the v232 CGIs on composits with sortOrders that include things that are not views and that are not included in the dimensions.
Index: src/hg/makeDb/trackDb/trackDb.nt.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.nt.ra,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/makeDb/trackDb/trackDb.nt.ra	6 May 2010 19:04:27 -0000	1.1
+++ src/hg/makeDb/trackDb/trackDb.nt.ra	28 May 2010 23:22:56 -0000	1.2
@@ -1,126 +1,128 @@
 # Neandertal Genome/Analysis tracks
 
 track ntSeqContigs
 compositeTrack on
 shortLabel Neandertal Cntgs
 longLabel Neandertal Sequence Contigs Generated by Genotype Caller
 group neandertal
 priority 4
 visibility hide
 type bam
 baseColorUseSequence lfExtra
 baseColorDefault diffBases
 showDiffBasesAllScales .
 showDiffBasesMaxZoom 100
 indelDoubleInsert on
 indelQueryInsert on
 showNames off
 noColorTag .
 subGroup1 sample Sample All=All Feld1=Feld1 Mez1=Mez1 Sid1253=Sid1253 Vi33dot16=Vi33.16 Vi33dot25=Vi33.25 Vi33dot26=Vi33.26
 allButtonPair on
 sortOrder sample=+
 dragAndDrop subTracks
+dimensions dimensionX=sample
 
     track bamAll
     parent ntSeqContigs on
     shortLabel All
     longLabel Contigs Generated from All Data
     subGroups sample=All
 
     track bamFeld1
     parent ntSeqContigs off
     shortLabel Feld1 Contigs
     longLabel Feld1 Contigs
     subGroups sample=Feld1
 
     track bamMez1
     parent ntSeqContigs off
     shortLabel Mez1 Contigs
     longLabel Mez1 Contigs
     subGroups sample=Mez1
 
     track bamSid1253
     parent ntSeqContigs off
     shortLabel Sid1253 Contigs
     longLabel Sid1253 Contigs
     subGroups sample=Sid1253
 
     track bamVi33dot16
     parent ntSeqContigs off
     shortLabel Vi33.16 Contigs
     longLabel Vi33.16 Contigs
     subGroups sample=Vi33dot16
 
     track bamVi33dot25
     parent ntSeqContigs off
     shortLabel Vi33.25 Contigs
     longLabel Vi33.25 Contigs
     subGroups sample=Vi33dot25
 
     track bamVi33dot26
     parent ntSeqContigs off
     shortLabel Vi33.26 Contigs
     longLabel Vi33.26 Contigs
     subGroups sample=Vi33dot26
 
 
 track ntSeqReads
 compositeTrack on
 shortLabel Neandertal Seq
 longLabel Neandertal Sequence Reads
 group neandertal
 priority 4.1
 visibility hide
 type bam
 baseColorUseSequence lfExtra
 baseColorDefault diffBases
 showDiffBasesAllScales .
 showDiffBasesMaxZoom 100
 indelDoubleInsert on
 indelQueryInsert on
 showNames off
 noColorTag .
 bamColorMode gray
 bamGrayMode aliQual
 subGroup1 sample Sample Feld1=Feld1 Mez1=Mez1 Sid1253=Sid1253 Vi33dot16=Vi33.16 Vi33dot25=Vi33.25 Vi33dot26=Vi33.26
 sortOrder sample=+
 dragAndDrop subTracks
 allButtonPair on
+dimensions dimensionX=sample
 
     track bamSLFeld1
     parent ntSeqReads
     shortLabel Feld1 Sequence
     longLabel Feld1 Sequence Reads
     subGroups sample=Feld1
 
     track bamSLMez1
     parent ntSeqReads
     shortLabel Mez1 Sequence
     longLabel Mez1 Sequence Reads
     subGroups sample=Mez1
 
     track bamSLSid1253
     parent ntSeqReads
     shortLabel Sid1253 Sequence
     longLabel Sid1253 Sequence Reads
     subGroups sample=Sid1253
 
     track bamSLVi33dot16
     parent ntSeqReads
     shortLabel Vi33.16 Sequence
     longLabel Vi33.16 Sequence Reads
     subGroups sample=Vi33dot16
 
     track bamSLVi33dot25
     parent ntSeqReads
     shortLabel Vi33.25 Sequence
     longLabel Vi33.25 Sequence Reads
     subGroups sample=Vi33dot25
 
     track bamSLVi33dot26
     parent ntSeqReads
     shortLabel Vi33.26 Sequence
     longLabel Vi33.26 Sequence Reads
     subGroups sample=Vi33dot26