File Changes for tdreszer

v234_preview to v234_base (2010-06-15 to 2010-06-22) v234

• src/hg/encode/encodeValidate/config/cv.ra
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    Did I say 76. No it is H3K479me2
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    Added 2 antibodies provisionally
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    CKM is male, not female
• src/hg/encode/encodeValidate/doEncodeValidate.pl
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    No more fileDb.ra, stopped obsolete RawSignals generation, made trackDb templates children of views
  • lines changed 22, context: html, text, full: html, text
    No more fileDb.ra, stopped obsolete RawSignals generation, made trackDb templates children of views
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile
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    UW DGF metadata for June 2010 freeze
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    blank in wrong spot screwed this one up
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    Displaying UW DNase submissions for Jun 2010 freeze
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    Adding wgEncodeUwHistone to hg19
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra
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    UW DGF metadata for June 2010 freeze
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra
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    Displaying UW DNase submissions for Jun 2010 freeze
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra
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    Adding wgEncodeUwHistone to hg19
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    Adding UW DGF after Jun 2010 freeze. Reordered UW Histine and Uw Dnase
  • lines changed 1, context: html, text, full: html, text
    Displaying UW DNase submissions for Jun 2010 freeze
  • lines changed 1, context: html, text, full: html, text
    Adding wgEncodeUwHistone to hg19
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwChIPSeq.ra
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    Minor update
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.html
  • lines changed 149, context: html, text, full: html, text
    Adding UW DGF after Jun 2010 freeze. Reordered UW Histine and Uw Dnase
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.ra
  • lines changed 280, context: html, text, full: html, text
    Adding UW DGF after Jun 2010 freeze. Reordered UW Histine and Uw Dnase
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.html
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    Preliminary descrition page from hg18
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.ra
  • lines changed 1559, context: html, text, full: html, text
    Adding UW DGF after Jun 2010 freeze. Reordered UW Histine and Uw Dnase
  • lines changed 2250, context: html, text, full: html, text
    Displaying UW DNase submissions for Jun 2010 freeze
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.html
  • lines changed 1, context: html, text, full: html, text
    Minor update
  • lines changed 80, context: html, text, full: html, text
    Adding wgEncodeUwHistone to hg19
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.ra
  • lines changed 2569, context: html, text, full: html, text
    Adding UW DGF after Jun 2010 freeze. Reordered UW Histine and Uw Dnase
  • lines changed 118, context: html, text, full: html, text
    FDR 1percent not 0.5 percent for peaks
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    Adding wgEncodeUwHistone to hg19