Commits for tdreszer
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v234_base to v235_preview (2010-06-22 to 2010-06-29) v235
- Added special features to mdbPrint to print SQL insert statements for expTable and spacial case extension for adding expIds to exisiting mdb objects.
- src/hg/makeDb/mdbUpdate/mdbPrint.c - lines changed 21, context: html, text, full: html, text
- Mark incoming ENCODE submissions as 'post' JUne 2010 freeze
- src/hg/utils/automation/Encode.pm - lines changed 1, context: html, text, full: html, text
- ignore ~ files created by gedit and other programs
- Changes to allow viewInTheMiddle template trackDb files to be patched in properly
- src/hg/encode/encodePatchTdb/encodePatchTdb.c - lines changed 50, context: html, text, full: html, text
- Link to composite should be db aware
- src/hg/encode/encodeStatus/hgShowEncodeSubmissions - lines changed 1, context: html, text, full: html, text
- SuperTracks needed to be slReversed before displaying. Took opportunity to add warnBox to top of hgTrackUi as it should be.
- src/hg/hgTrackUi/hgTrackUi.c - lines changed 1, context: html, text, full: html, text
- Metadata for UNC OpenChromatin UNC FAIRE June 2010 freeze
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 1491, context: html, text, full: html, text
- Adding UNC FAIRE June 2010 freeze data to hg19 and updated Open Chrom descriptions
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 69, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html - lines changed 65, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.ra - lines changed 649, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.html - lines changed 269, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.ra - lines changed 925, context: html, text, full: html, text
- Metadata for Duke Open Chrom DNase June 2010 freeze
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 3107, context: html, text, full: html, text
- Adding Duke DNase June 2010 freeze data to hg19 and moving composites to supertracks
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncodeSydhHistone.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.ra - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.html - lines changed 309, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.ra - lines changed 925, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.ra - lines changed 1, context: html, text, full: html, text
- Fixed treatment!= to be interpreted as treatment NOT EXISTS
- One more fileName error that Jim caught
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeHudsonalphaChipSeq.ra - lines changed 2, context: html, text, full: html, text
- Removeing Cshl include as Cricket says it is not ready
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- Metadata for UTA Open Chrom ChIPseq June 2010 freeze
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 2959, context: html, text, full: html, text
- Adding UTA ChIP data for June Freeze to hg19
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.html - lines changed 309, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.ra - lines changed 969, context: html, text, full: html, text
- Changed some file names that Jim noticed were inaccurate
- src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeHudsonalphaChipSeq.ra - lines changed 21, context: html, text, full: html, text
- Removed some erroneous dateResubmitteds
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 47, context: html, text, full: html, text
- Metadata for Broad Histone June 2010 freeze
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 7817, context: html, text, full: html, text
- Adding Broad Histone June 2010 freeze tracks
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.html - lines changed 129, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.ra - lines changed 1229, context: html, text, full: html, text
- Filled out details for 2 antibodies for Broad
- src/hg/encode/encodeValidate/config/cv.ra - lines changed 20, context: html, text, full: html, text
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