45f040e594ebb09ff40717a5b5961f5430926820 mary Fri Jul 23 15:11:04 2010 -0700 updating link to source downloads to include executables in the language as well diff --git src/hg/htdocs/util.html src/hg/htdocs/util.html index 137daf9..7c72244 100755 --- src/hg/htdocs/util.html +++ src/hg/htdocs/util.html @@ -1,106 +1,104 @@ <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2//EN"> <HTML> <HEAD> <META HTTP-EQUIV="Content-Type" CONTENT="text/html;CHARSET=iso-8859-1"> <TITLE>UCSC Genome Browser: Utilities</TITLE> <LINK REL="STYLESHEET" HREF="style/HGStyle.css"> </HEAD> <BODY BGCOLOR="FFF9D2" LINK="0000CC" VLINK="#330066" ALINK="#330066"> <A NAME="TOP"></A> <TABLE BORDER=0 CELLPADDING=0 CELLSPACING=0 WIDTH="100%"><TR><TH COLSPAN=2 ALIGN="left"><IMG SRC="images/title.jpg"></TH></TR> <TR><TD COLSPAN=2 HEIGHT=40><!--#include virtual="inc/topbar.html"--></TD></TR> <!--Content Tables-------------------------------------------------------> <TR><TD COLSPAN=2 CELLPADDING=10> <!--outer table is for border purposes--> <TABLE WIDTH="100%" BGCOLOR="#888888" BORDER="0" CELLSPACING="0" CELLPADDING="1"> <TR><TD> <TABLE BGCOLOR="fffee8" WIDTH="100%" BORDER="0" CELLSPACING="0" CELLPADDING="0"> <TR><TD> <TABLE BGCOLOR="D9E4F8" BACKGROUND="images/hr.gif" WIDTH=100%> <TR><TD> <FONT SIZE="4"><b> UCSC Genome Browser Utilities</b></FONT> </TD></TR> </TABLE> <TABLE BGCOLOR="fffee8" WIDTH="100%" CELLPADDING=0> <TR><TH HEIGHT=10></TH></TR> <TR><TD WIDTH=10> </TD> <TD> <P> This page contains links to tools and utilities created by the UCSC Genome Bioinformatics Group. <P> <UL> <LI><A HREF="cgi-bin/hgLiftOver">Batch Coordinate Conversion (liftOver)</A> - converts genome coordinates and genome annotation files between assemblies. The current version supports both forward and reverse conversions, as well as conversions between selected species. <LI><A HREF="http://www.soe.ucsc.edu/~kent/dnaDust/dnadust.html">DNA Duster</A> - removes formatting characters and other non-sequence-related characters from an input sequence. Offers several configuration options for the output format, including translated protein. <LI><A HREF="http://www.soe.ucsc.edu/~kent/protDust/protDust.html">Protein Duster</A> - removes formatting characters and other non-sequence-related characters from an input sequence. Offers several configuration options for the output format. <LI><A HREF="cgi-bin/phyloGif">Phylogenetic Tree Gif Maker</A> - creates a gif image from the phylogenetic tree specification given. Offers several configuration options for branch lengths, normalized lengths, branch labels, legend etc. - <LI><A HREF="http://hgdownload.cse.ucsc.edu/downloads.html#source_downloads">Source Code Downloads</A> - - The Genome Browser, Blat and liftOver source code is - freely downloadable for academic, noncommercial, and - personal use. - + <LI><A HREF="http://hgdownload.cse.ucsc.edu/downloads.html#source_downloads">Executable and Source Code Downloads</A> + - executable and source code downloads of the Genome Browser, + Blat and liftOver. </UL> </TD> <TD WIDTH=15></TD> </TR> </TABLE> <BR> </TD></TR> </TABLE> </TD></TR> </TABLE> <!--Content Tables-------------------------------------------------------> <!--Commented out until training materials are available <TR><TD COLSPAN=2 CELLPADDING=10> <TABLE WIDTH="100%" BGCOLOR="#888888" BORDER="0" CELLSPACING="0" CELLPADDING="1"> <TR><TD> <TABLE BGCOLOR="fffee8" WIDTH="100%" BORDER="0" CELLSPACING="0" CELLPADDING="0"> <TR><TD> <TABLE BGCOLOR="D9E4F8" BACKGROUND="images/hr.gif" WIDTH=100%> <TR><TD> <FONT SIZE="3"><b> UCSC Genome Browser Educational Materials</b></FONT> </TD></TR> </TABLE> <TABLE BGCOLOR="fffee8" WIDTH="100%" CELLPADDING=0> <TR><TH HEIGHT=10></TH></TR> <TR><TD WIDTH=10> </TD><TD> <P> </TD> <TD WIDTH=15></TD> </TR></TABLE> <br></TD></TR> </TABLE> </TD></TR> </TABLE> --> </TD></TR> </TABLE> </BODY></HTML>