File Changes for angie

v239_preview to v239_base (2010-08-24 to 2010-08-31) v239

• src/hg/makeDb/doc/dm2.txt
  • lines changed 71, context: html, text, full: html, text
    Adding new composite track BDTNP DNase, and new subtracks for BDTNP ChIP/chip. Since composite labels are no longer displayed above subtracks in hgTracks, I added track shortLabel to the beginning of subtrack longLabels.
  • lines changed 23, context: html, text, full: html, text
    Replaced BDTNP DNase bigWigs w/normalized data from Mark Biggin.
• src/hg/makeDb/doc/hg18.nt.txt
  • lines changed 1, context: html, text, full: html, text
    Follow-up to d03112c5 -- correct the order of S SNPs ancestral/derived codes in the make doc too.
• src/hg/makeDb/hgBbiDbLink/hgBbiDbLink.c
  • lines changed 2, context: html, text, full: html, text
    Add 'drop table if exists' before create, for those of us who have to run this command more than once sometimes. :)
• src/hg/makeDb/trackDb/drosophila/trackDb.ra
  • lines changed 421, context: html, text, full: html, text
    Adding new composite track BDTNP DNase, and new subtracks for BDTNP ChIP/chip. Since composite labels are no longer displayed above subtracks in hgTracks, I added track shortLabel to the beginning of subtrack longLabels.
  • lines changed 11, context: html, text, full: html, text
    Replaced BDTNP DNase bigWigs w/normalized data from Mark Biggin.
• src/hg/makeDb/trackDb/human/ntModernHumans.html
  • lines changed 2, context: html, text, full: html, text
    [MLQ #763 inconsistency with Neandertal Selection Sweep Scan display]: user found that ntSss description had Papuan and Han in the wrong order, confirmed by Ed Green. Swapped them back and also put the modern human BAM in the same order as the ntSss codes.
• src/hg/makeDb/trackDb/human/ntSssSnps.html
  • lines changed 2, context: html, text, full: html, text
    [MLQ #763 inconsistency with Neandertal Selection Sweep Scan display]: user found that ntSss description had Papuan and Han in the wrong order, confirmed by Ed Green. Swapped them back and also put the modern human BAM in the same order as the ntSss codes.
• src/hg/makeDb/trackDb/human/trackDb.nt.ra
  • lines changed 7, context: html, text, full: html, text
    [MLQ #763 inconsistency with Neandertal Selection Sweep Scan display]: user found that ntSss description had Papuan and Han in the wrong order, confirmed by Ed Green. Swapped them back and also put the modern human BAM in the same order as the ntSss codes.