Commits for angie

v238_base to v239_preview (2010-08-17 to 2010-08-24) v239

• Added support for new trackDb setting 'tableBrowser off' which prevents hgTables from displaying a track (if related tables need to be excluded from All Tables, they go after 'off', space-sep.
  • src/hg/hgTables/hgTables.c - lines changed 15, context: html, text, full: html, text
  • src/hg/hgTables/hgTables.h - lines changed 1, context: html, text, full: html, text
  • src/hg/hgTables/mainPage.c - lines changed 35, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/README - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 1, context: html, text, full: html, text
• In overrideField, ignore release tag because it has already been processed and removed from overTd->settingsHash. Now we can have release-specific overrides.
  • src/hg/lib/trackDbCustom.c - lines changed 1, context: html, text, full: html, text
• [Genome Browser - Feature #559] Mary-Claire King's wish list: split hg19.snp131 into two tracks, one with only the SNPs marked as clinically associated by dbSNP, and the other with everything else. At Jim's request, making the clinical SNPs hidden by default, and the non-clinical visible by default to give a picture of typical human variation.
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text
  • src/hg/hgc/hgc.c - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg19.txt - lines changed 32, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp131Clinical.html - lines changed 261, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/snp131NonClinical.html - lines changed 265, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/trackDb.ra - lines changed 61, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/tagTypes.tab - lines changed 2, context: html, text, full: html, text