32e6f06a36a70994554082d2c7fd6e83c5cbb7f9
mary
  Tue Aug 17 16:26:10 2010 -0700
putting the cat in the news, archiving old stories
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index ae1b80f..e75b0a2 100644
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+++ src/hg/htdocs/indexNews.html
@@ -27,14 +27,45 @@
                     <!-- start news -->
 
 		    <P>
-		    <FONT FACE="courier" SIZE="3"><B>23 July 2010 - BigBed/BigWig Paper Published</B></FONT>
+		    <FONT FACE="courier" SIZE="3"><B>18 August 2010 - Cat Genome Browser Available</B></FONT>
                     </P>
-		    <P>Last summer, we announced the release of new data formats for very large data sets: BigBed
-		    and BigWig. Read more about these data formats
-		    <A HREF="https://lists.soe.ucsc.edu/pipermail/genome-announce/2009-July/000165.html" 
-		    TARGET=_blank>here</A>. As a follow up, we are pleased to announce that we have published a 
-		    paper on these new file formats.
+		    We have released a Genome Browser for the latest assembly of Cat (<em>Felis catus</em>). 
+		    The GTB V17E assembly (December 2008, UCSC version felCat4) was produced by the NHGRI 
+		    Genome Technology Branch and NIH Intramural Sequencing Center, Maryland; Agencourt 
+		    Bioscience Corporation, Massachusetts; NCI Laboratory of Genomic Diversity, Maryland; 
+		    and Hill's Pet Nutrition, Inc, Kansas. The mitochondrial genome was sequenced by NCI 
+		    Laboratory of Genomic Diversity. For detailed sequencing and assembly information, see 
+		    the NCBI Felis catus  
+		    <a href="http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=10703"
+		    TARGET=_blank>assembly page</a>.
+		    </p>
+
+		    <p>
+		    Downloads of the Cat data and annotations may be obtained from the 
+		    <A HREF="ftp://hgdownload.cse.ucsc.edu/goldenPath/felCat4/">UCSC FTP site</A>
+		    or 
+		    <A HREF="http://hgdownload.cse.ucsc.edu/downloads.html#cat">Downloads</A> 
+		    page. These data have been freely provided for use in the UCSC Genome Browser 
+		    with specific conditions for use.
+		    </p>
+
+		    <p>
+		    Many thanks to NHGRI, Agencourt Bioscience Corporation, NCI and Hill's Pet Nutrition 
+		    for providing these data. The felCat4 annotation tracks were generated by UCSC and 
+		    its collaborators. We'd also like to acknowledge the UCSC Cat browser team: Chin Li, 
+		    Antonio Coelho, Mary Goldman and Donna Karolchik. See the
+		    <A HREF="goldenPath/credits.html#cat_credits">Credits</A>
+	            page for a detailed list of the organizations and individuals who contributed to 
+		    this release.
+		    </p>
+
 
+		    </P><HR>
+
+		    <P>
+		    <FONT FACE="courier" SIZE="3"><B>23 July 2010 - BigBed/BigWig Paper Published:</b></FONT>
+		    We are pleased to announce that we have published a paper on the BigBed and BigWig
+		    format. <A HREF="goldenPath/newsarch.html#072310">Read more</A>.
                     <BLOCKQUOTE>
 			Kent WJ, Zweig AS, Barber G, Hinrichs AS, Karolchik D.
 			<A HREF="http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btq351"
@@ -42,17 +73,6 @@
 			<EM>Bioinformatics</EM>. 2010 July 17. Published online in advance of print.
                     </BLOCKQUOTE>
 
-		   <P>From the abstract:<BR>
-		   BigWig and BigBed files are compressed binary indexed files containing data at several 
-		   resolutions that allow the high-performance display of next-generation sequencing experiment 
-		   results in the UCSC Genome Browser. The visualization is implemented using a multi-layered 
-		   software approach that takes advantage of specific capabilities of web-based protocols and 
-		   Linux and UNIX operating systems files, R trees, and various indexing and compression tricks. 
-		   As a result, only the data needed to support the current browser view is transmitted rather 
-		   than the entire file, enabling fast remote access to large distributed data sets.</P>
-
-		   <P>The supplemental materials (available online) contain the technical details about the 
-		   implementation.
 		    </P><HR>
 
 		    <P>
@@ -63,13 +83,6 @@
 		    <A HREF="goldenPath/newsarch.html#071510">Read more</A>.
 		    </P>
 
-		    <HR>
-		    <FONT FACE="courier" SIZE="3"><B>4 June 2010 - dbSNP
-131 Available for hg19: </B></FONT>
-		    We are pleased to announce the release of dbSNP build 131,
-		    available from on the human assembly (GRCh37/hg19).  
-		    <A HREF="goldenPath/newsarch.html#060410">Read more</A>.
-		    </p>
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