0cc6f12b82336610b9250bd5df050ebde29f314c braney Fri Sep 3 14:34:14 2010 -0700 update to reflect reality, apparently these haven't been used for a while diff --git src/hg/lib/gencodeGeneClass.as src/hg/lib/gencodeGeneClass.as index d756137..3ba5911 100644 --- src/hg/lib/gencodeGeneClass.as +++ src/hg/lib/gencodeGeneClass.as @@ -1,6 +1,12 @@ table gencodeGeneClass "Class for Gencode genes" ( + string geneId; "Gene ID for Gencode gene" string name; "Transcript ID for Gencode gene" + string transcriptType; "Transcript type for Gencode gene" + int level; "Gencode level" + string class; "Class of gene. enum('Antisense', 'Antisense_val', 'Artifact', 'Known', 'Novel_CDS', 'Novel_transcript', 'Novel_transcript_val', 'Putative', 'Putative_val', 'TEC', 'Processed_pseudogene', 'Unprocessed_pseudogene', 'Pseudogene_fragment', 'Undefined')" + string ottGeneId; "Otter Gene id for Gencode gene" + string ottTranscriptId; "Otter Transcript id for Gencode gene" )