File Changes for giardine

v241_preview to v241_base (2010-09-21 to 2010-09-28) v241

• src/hg/hgCustom/hgCustom.c
  • lines changed 3, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
  • lines changed 2, context: html, text, full: html, text
    take link out to bedDetail format until more testing is done
• src/hg/hgTables/custom.c
  • lines changed 19, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTables/filterFields.c
  • lines changed 19, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTables/hgTables.c
  • lines changed 1, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTables/joining.c
  • lines changed 1, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTables/schema.c
  • lines changed 52, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTracks/hgTracks.c
  • lines changed 13, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTracks/hgTracks.h
  • lines changed 6, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgTracks/simpleTracks.c
  • lines changed 202, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgc/hgc.c
  • lines changed 136, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/hgc/hgc.h
  • lines changed 6, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/htdocs/FAQ/FAQformat.html
  • lines changed 123, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/htdocs/goldenPath/help/customTrackText.html
  • lines changed 83, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/inc/bedDetail.h
  • lines changed 76, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/inc/pgSnp.h
  • lines changed 5, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/bedDetail.as
  • lines changed 18, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/bedDetail.c
  • lines changed 312, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/bedDetail.sql
  • lines changed 24, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/customFactory.c
  • lines changed 316, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/makefile
  • lines changed 1, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/pgSnp.c
  • lines changed 32, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/lib/trackDbCustom.c
  • lines changed 13, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/makeDb/hgLoadBed/hgLoadBed.c
  • lines changed 19, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/makeDb/hgLoadBed/makefile
  • lines changed 1, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.
• src/hg/makeDb/trackDb/README
  • lines changed 5, context: html, text, full: html, text
    Adds new track type bedDetail to custom and resident tracks, also adds pgSnp (personal genome SNPs) as custom track type. bedDetail is bed4 to bed12, with 2 extra fields for an ID and description for hgc clicks.