Commits for braney

v240_base to v241_preview (2010-09-14 to 2010-09-21) v241

• add search method for 2wayConsPseudo track
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencode.ra - lines changed 8, context: html, text, full: html, text
• add a few relationships for Gencode V4
  • src/hg/makeDb/schema/all.joiner - lines changed 9, context: html, text, full: html, text
• add transcriptType to Gencode hgc page
  • src/hg/hgc/hgc.c - lines changed 9, context: html, text, full: html, text
• take out wayward space
  • src/hg/lib/mafGene.c - lines changed 1, context: html, text, full: html, text
• move the pal link for refGene down into "links to sequence"
  • src/hg/hgc/hgc.c - lines changed 86, context: html, text, full: html, text
• added release beta,public
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaChipSeq.ra - lines changed 362, context: html, text, full: html, text
• changing SK-N-SHRA to HTB-11
  • src/hg/makeDb/trackDb/human/hg18/wgEncodeHudsonalphaChipSeq.new.ra - lines changed 386, context: html, text, full: html, text
• new HudsonAlpha ChIP-seq
  • src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
• change SKN-SH-RA to HTB-11
  • src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeHudsonalphaChipSeq.ra - lines changed 50, context: html, text, full: html, text
• change table names for different metadata
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibTfbs.ra - lines changed 6, context: html, text, full: html, text
• fix up some table and file names
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 193, context: html, text, full: html, text
• v241 preview
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text