d83e58012a5e77fe65f840071d230e171bc6b2a6 angie Tue Oct 5 15:39:39 2010 -0700 Redmine Track #1261 (Construct track of "bad apple" coverage anomalies in human genome): Added -allowStartEqualEnd (as in hgLoadBed) so that 0-length items like insertions aren't lost -- Mary-Claire King pointed out the lack of insertions in the first version of the track, oops. Majorly refactored bedIntersect.c and added test cases. diff --git src/hg/bedIntersect/makefile src/hg/bedIntersect/makefile index d8e3b86..04321bb 100644 --- src/hg/bedIntersect/makefile +++ src/hg/bedIntersect/makefile @@ -9,7 +9,11 @@ bedIntersect: $O $(MYLIBS) ${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/bedIntersect $O $(MYLIBS) $L -# ${STRIP} ${BINDIR}/bedIntersect${EXE} + ${STRIP} ${BINDIR}/bedIntersect${EXE} + +test:: + (cd tests && ${MAKE} test) clean:: rm -f ${O} + (cd tests && ${MAKE} clean)