Commits for vsmalladi

v242_preview to v242_base (2010-10-05 to 2010-10-12) v242

• Added line to warn that file was genereted by DCC and is not submitted to GEO
  • src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg - lines changed 4, context: html, text, full: html, text
• Soft File for CSHL Short RNA-seq, submission for GEO.
  • src/hg/encode/geoSofts/ucsc_encode_dcc_wgEncodeCshlShortRnaSeq.soft - lines changed 339, context: html, text, full: html, text
• Added Path for aspera to instructions
  • src/hg/encode/encodeMkGeoPkg/README.txt - lines changed 1, context: html, text, full: html, text
• Updated Makefile to accomadate user specific htdocs style directories
  • src/hg/htdocs/style/makefile - lines changed 8, context: html, text, full: html, text
• Updated track Description.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethylRrbs.html - lines changed 98, context: html, text, full: html, text
• Added missing metadata for submissions 1220 and 1221
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylRrbs.ra - lines changed 305, context: html, text, full: html, text
• Removed GEO Series information from labVersion and added it to accession for 2 objects
  • src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeYaleChIPseq.ra - lines changed 5, context: html, text, full: html, text
• fixed the protocol link to include the organism in the path
  • src/hg/encode/encodeMkGeoPkg/encodeMkGeoPkg - lines changed 3, context: html, text, full: html, text
• Added Cell line SK-SY5Y and protocol
  • src/hg/encode/encodeValidate/config/cv.ra - lines changed 17, context: html, text, full: html, text
• Added GEO Sample and Series information to meta-data
  • src/hg/makeDb/trackDb/human/hg18/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 39, context: html, text, full: html, text