dafa0da9b989d8661390ed4cfec8adcc68d5f3de
angie
  Mon Oct 18 16:02:34 2010 -0700
Redmine Bug #1304 (alignment numbering wrong when "viewing parts ofalignment"): fixed bug I introduced into fuzzyShow.c back in 2007.
Also in hgc.c, trim the "Alignment of <query> to <chrN:s-e>" message
at top of alignment display frame to query bounds (not just viewing
window), to be more consistent with message in whole-alignment view.

diff --git src/lib/fuzzyShow.c src/lib/fuzzyShow.c
index 28afadb..7236b62 100644
--- src/lib/fuzzyShow.c
+++ src/lib/fuzzyShow.c
@@ -242,7 +242,7 @@
     if (rcHaystack)
 	hayExtremity = hayNumOffset + haySize - hayPaddedOffStart;
     else
-	hayExtremity = hayNumOffset + hayPaddedOffEnd;
+	hayExtremity = hayNumOffset + hayPaddedOffStart;
     }
 
 if (showJumpTable)