Commits for hiram

v242_base to v243_preview (2010-10-12 to 2010-10-19) v243

• turning on frames annotations
  • src/hg/makeDb/trackDb/worm/ce9/trackDb.ra - lines changed 1, context: html, text, full: html, text
• add links to assembly information and adding frames on ce9 10-way
  • src/hg/makeDb/doc/bruMal1.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/caePb2.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/caeRem3.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/ce9.txt - lines changed 305, context: html, text, full: html, text
  • src/hg/makeDb/doc/haeCon1.txt - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/doc/melHap1.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/melInc1.txt - lines changed 1, context: html, text, full: html, text
• initial text edited from hg19 cons46way
  • src/hg/makeDb/trackDb/worm/ce9/cons10way.html - lines changed 437, context: html, text, full: html, text
• have WS210 genes on all the nematodes for 10-way frames
  • src/hg/makeDb/doc/ce9.txt - lines changed 230, context: html, text, full: html, text
  • src/hg/makeDb/doc/priPac1.txt - lines changed 15, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/caeJap3/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce9/cons10way.html - lines changed 10, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce9/sangerGene.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/ce9/trackDb.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/haeCon1/trackDb.ra - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/priPac2/trackDb.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/worm/trackDb.ra - lines changed 16, context: html, text, full: html, text
• add a verbose to the fields option to see databases checked
  • src/hg/makeDb/schema/joinerCheck/joinerCheck.c - lines changed 7, context: html, text, full: html, text
• prototype of phoneHome() function, currently disabled
  • src/hg/lib/web.c - lines changed 34, context: html, text, full: html, text
• adding new chainNet definitions
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• fixup type of maf net and gene annotations
  • src/hg/makeDb/trackDb/worm/ce9/cons10way.html - lines changed 25, context: html, text, full: html, text
• ce9 in the pushQ
  • src/hg/makeDb/doc/ce9.txt - lines changed 123, context: html, text, full: html, text
• adding blastCe9SG01
  • src/hg/makeDb/schema/all.joiner - lines changed 6, context: html, text, full: html, text
• construct ce6 to ce9 liftOver
  • src/hg/makeDb/doc/ce6.txt - lines changed 18, context: html, text, full: html, text