Commits for cricket
switch to files view, user index
v243_base to v244_preview (2010-11-02 to 2010-11-16) v244
- removing a copy of wgEncodeRikenCage.ra
- src/hg/makeDb/trackDb/human/hg18/wgEncodeRikenCage.new.ra - lines changed 721, context: html, text, full: html, text
- I have merged my labels with Tims for typeOfTerm, I still have the SpecialStory variables to check on
- src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 87, context: html, text, full: html, text
- change freeze date
- src/hg/utils/automation/Encode.pm - lines changed 2, context: html, text, full: html, text
- Changed DAF to display gtf files and to take different views based on GENCODE version
- src/hg/encode/DAFs/2.0/caltechRnaSeq.daf - lines changed 51, context: html, text, full: html, text
- changed Gerlad to GERALD and removed artifactually
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.html - lines changed 2, context: html, text, full: html, text
- removed the grey shading option for Transfrags Issue#44Item#68
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.ra - lines changed 2, context: html, text, full: html, text
- removed the post ENCODE June Freeze tag
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 473, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 77, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 481, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 15, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisDnaPet.ra - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 81, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaSeq.ra - lines changed 19, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylRrbs.ra - lines changed 108, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylSeq.ra - lines changed 119, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibTfbs.ra - lines changed 91, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 52, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 43, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 38, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra - lines changed 199, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhHistone.ra - lines changed 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 43, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwAffyExonArray.ra - lines changed 113, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra - lines changed 43, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra - lines changed 201, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 343, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwTfbs.ra - lines changed 200, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeYaleRnaSeq.ra - lines changed 13, context: html, text, full: html, text
- added the fastqs from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 639, context: html, text, full: html, text
- changed visibility settings
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra - lines changed 3, context: html, text, full: html, text
- added 2 new tracks, changed long labels to new model
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.html - lines changed 19, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.ra - lines changed 240, context: html, text, full: html, text
- changed long labels
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra - lines changed 80, context: html, text, full: html, text
- changed K652 to K562
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwAffyExonArray.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeYaleRnaSeq.ra - lines changed 1, context: html, text, full: html, text
- turned the default settings to off for Transfrags
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.ra - lines changed 34, context: html, text, full: html, text
- changed spelling errors and added a sam tools reference
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.html - lines changed 5, context: html, text, full: html, text
- cell to whole cell
- src/hg/makeDb/trackDb/human/hg19/wgEncodeAffyRnaChip.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra - lines changed 13, context: html, text, full: html, text
- changed bam setting to color by strand
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.ra - lines changed 1, context: html, text, full: html, text
- changed fpkm1&2 type to fpkm, changed insDitrib to insDist as it is in the DAFs
- src/hg/encode/encodeValidate/doEncodeValidate.pl - lines changed 2, context: html, text, full: html, text
- added fastqs
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 624, context: html, text, full: html, text
- Bug 1126, fixed typos
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.html - lines changed 2, context: html, text, full: html, text
- chnaged long labels to new convention
- src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.ra - lines changed 23, context: html, text, full: html, text
- changed long labels, added Tier 1 comment
- src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyGeneSt.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeSunyAlbanyTiling.ra - lines changed 10, context: html, text, full: html, text
- New notes file for SUNY Tiling
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyAlbanyTiling.release1.notes - lines changed 60, context: html, text, full: html, text
- New notes file for SUNY Tiling
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeSunyAlbanyGeneSt.release1.notes - lines changed 86, context: html, text, full: html, text
- added information about the custom tags
- src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaSeq.html - lines changed 2, context: html, text, full: html, text
- standardizing display
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.ra - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.html - lines changed 131, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.ra - lines changed 224, context: html, text, full: html, text
- changing display to explain U and D, issue#1206
- src/hg/makeDb/trackDb/human/hg18/wgEncodeCaltechRnaSeq.html - lines changed 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/wgEncodeCaltechRnaSeq.ra - lines changed 140, context: html, text, full: html, text
- added fastqs from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylSeq.ra - lines changed 545, context: html, text, full: html, text
- added fastqs from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 8828, context: html, text, full: html, text
- added fastqs from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromFaire.ra - lines changed 810, context: html, text, full: html, text
- added fastqs from hg18
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 1426, context: html, text, full: html, text
- added bioRep
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 391, context: html, text, full: html, text
switch to files view, user index